Pairwise Alignments

Query, 497 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 589 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 231 MKKIKESKKEVDFNTVDEYINSIINELNYYMGMDEFKSKVDSILTLIMRFEDLMTFKDKI 290
           +   +E K  V+   + + +N  +              + D I  L+ R E  +T   ++
Sbjct: 352 LSHFEELKLRVNLQLLSDLVNGFV--------------QFDHIQPLLKRIESSLTSLQRV 397

Query: 291 TAINYNPIQDIKENYVNIVDISELDESSTDL--IISYFTGEILKDRKKV--LWDTKVAKP 346
             I  NP        ++++ +  L +S+ ++  II     +   D  KV  + D+   K 
Sbjct: 398 IEIGENP-------KLHLLTVVSLRKSNQEIKKIIPLLLAKYYYDSHKVTVINDSPPKKT 450

Query: 347 IFIIYEEAH--LIVPQNRPTKS----KIPI-SKIAREGRKFGVGICLVSQRPKTLDQESL 399
             +I +EAH  L +  NR ++S    ++ +  +I +EGRKFG  + L SQRP  +    +
Sbjct: 451 FHMIIDEAHNILSMQSNRESESWKDYRLELFEEIIKEGRKFGFYLTLSSQRPADISSTIM 510

Query: 400 SQCNNFIISKLIEPSDQKHVQHASENLSEDLLNQLPGLNVGEAVIIGPCLKIPAMVKIKR 459
           SQ +NF I +L+   D   ++++   L     + +P L  G AV+ G    IP +V+ K 
Sbjct: 511 SQIHNFFIHRLVNDRDLLLLENSISTLDALSRSMIPNLARGCAVVTGTSFDIPMIVQFKA 570

Query: 460 F--EGEYGGEDVKFDELW 475
              E +    DV   +LW
Sbjct: 571 LSKEAQPDSGDVDLTKLW 588



 Score = 35.4 bits (80), Expect = 6e-06
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 104 YDASEKILGEIFSKGTIE--IGNLISADSKVKLDVNKLCSRHLAILAITGMGKSNTVSVL 161
           Y  S+K + +++ +G  +  +G ++  +  V L    L + H+ +   TG GKSNT++ L
Sbjct: 107 YLMSDKQVRQVYGEGDDDFVVGEILKEELSVSLPWASLFNTHIGVFGNTGSGKSNTLTTL 166

Query: 162 LEEL 165
             +L
Sbjct: 167 YTKL 170