Pairwise Alignments

Query, 442 a.a., FAD-dependent oxidoreductase from Methanococcus maripaludis S2

Subject, 566 a.a., FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  225 bits (573), Expect = 3e-63
 Identities = 142/459 (30%), Positives = 233/459 (50%), Gaps = 27/459 (5%)

Query: 3   VVIIGSGAGGLTTASNIKKHDKNAKVTVITSDKYIAYSPCAIPYVIGEEIADFDTIIMHT 62
           ++IIG  AGG + A+  ++  + A++ +    +Y++++ C +PY I  EIA    +++ T
Sbjct: 4   ILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQT 63

Query: 63  PKDYKAK-GIDVIVEAEVLDVVSGENKVIYKK--DGTETELKYDNLVLATGGTPFVPPIE 119
           P+ +KA+  ++V V+ EV+ +      V  ++  DG+E +  YD L+L+ G  P VPPI 
Sbjct: 64  PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIP 123

Query: 120 GVTLDGVFKVRTIEDGQKITEWAK--DTKNVVVAGAGAIGIEIAFGLKEIGLDVTVVEMV 177
           GV       +R I D  +I +  +  + ++  V G G IG+E+   L  +G+  T++E+ 
Sbjct: 124 GVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELA 183

Query: 178 PQVFPRALDPDMAETVQKYLEEQGIKIILEKPVGKI------------IGNDKVEAVLVG 225
            QV    +D +MA    + + +QG+ + L   + ++             G D     + G
Sbjct: 184 DQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKG 242

Query: 226 E--------ETIPAEMVIMSTGVRSNIELAKSAGCDIGRWA-VLTNEKMQTSIPNIYAVG 276
                    E +  +++IM+ GVR   +LA+ AG  IG    +  N  MQTS P IYAVG
Sbjct: 243 HLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVG 302

Query: 277 DCVEVIDAITMQNTLSPFGTTAVRQGKVAAKAIVKLEAEIKPVLNSMVSKIGKLEIGGTG 336
           D VE  D +T Q  L P    A RQG++AA  +   E   +    + + K+  L +G TG
Sbjct: 303 DAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATG 362

Query: 337 MTETAAKMNGIEIVLGYSKALTRARYYPGGKPIYIKMVADKMTKKVIGCQIISEERVAER 396
             E   K  GI     Y    + A YYPG + +  K++ D +   + G Q + ++ + +R
Sbjct: 363 KNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKR 422

Query: 397 VDAMSVAISNGMTVEELANQEFCYAPPVSMVIDPIVFAA 435
           +D M+VA   GMTVE+L + E  YAPP     D I  AA
Sbjct: 423 IDVMAVAQRAGMTVEQLQHLELSYAPPYGSAKDVINQAA 461