Pairwise Alignments

Query, 225 a.a., NERD domain-containing protein from Methanococcus maripaludis S2

Subject, 225 a.a., NERD domain-containing protein from Methanococcus maripaludis JJ

 Score =  412 bits (1059), Expect = e-120
 Identities = 207/225 (92%), Positives = 210/225 (93%)

Query: 1   MGFITSLSKHSLSKISGKLNEYPLSLFLRNLDKSDYFILKDYNLDCNGNSSVIDYIIVSK 60
           MGFITSLSKHSLS ISGKLNEYPLSLFLRNLDK DYFILKDYNL  NGN SVIDYIIVSK
Sbjct: 1   MGFITSLSKHSLSPISGKLNEYPLSLFLRNLDKKDYFILKDYNLGRNGNLSVIDYIIVSK 60

Query: 61  YGIFVINSKNLPGTIAHKDGKWIQKINGSENLIENPVLETYNLVNLLKKEVIAVKDIEII 120
           YGIFVINSKNLPGTI +KDGKW+QKINGSENLIENPVLETYNLVNLLKKEVIAVKDIEII
Sbjct: 61  YGIFVINSKNLPGTITNKDGKWVQKINGSENLIENPVLETYNLVNLLKKEVIAVKDIEII 120

Query: 121 PIIIFNATSKLDFNLNGIINSPEIIRKIKSYNIPKITQKKCECIFYSLLHSNNSKNGLNV 180
           PIIIFNATSKLDFNL+GIINSPEIIRKIKSYN P ITQKKCE I YSLL  NNSKNGLNV
Sbjct: 121 PIIIFNATSKLDFNLDGIINSPEIIRKIKSYNNPIITQKKCESIIYSLLQPNNSKNGLNV 180

Query: 181 SKYPVKKIIDESNKHFCPKCGSKLKVSEIEKSFVCPNNNKCGSKL 225
            KYPVKKIIDE NKHFCPKCGSKLKVSEIEKSFVCPNN KCGSKL
Sbjct: 181 VKYPVKKIIDEGNKHFCPKCGSKLKVSEIEKSFVCPNNKKCGSKL 225