Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 169 a.a., acetoin utilization protein AcuB from Vibrio cholerae E7946 ATCC 55056

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 148 VKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVV-SEEKLVGIITSTDFVKLFGSDWA 206
           V+D MT +         L D    M     R +P+V + +KL+GI++  D   L   + +
Sbjct: 24  VEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDL--LAAQESS 81

Query: 207 FNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIGL 266
                 G+        + ++M T++ SV     L ++   M +  IG LPVV  + L+G+
Sbjct: 82  LQRSAQGDSLAF-ETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGI 140

Query: 267 ITEKDIV 273
           IT+ D V
Sbjct: 141 ITDSDFV 147



 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 9/126 (7%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLK---- 139
           V+++MT +   +     L++   L     I  +P++D +  L+  +++RD++   +    
Sbjct: 24  VEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQ 83

Query: 140 -----DQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITS 194
                D +  +  + + M  +V    P   LK+ A  M ++    LPVV+++ LVGIIT 
Sbjct: 84  RSAQGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITD 143

Query: 195 TDFVKL 200
           +DFV +
Sbjct: 144 SDFVTI 149



 Score = 34.3 bits (77), Expect = 2e-06
 Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 216 REITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD-GEKLIGLITEKDIV 273
           +E+  ++++D+M  +  ++     L DA   M  L+I  +P+VD  +KL+G+++++D++
Sbjct: 17  KELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLL 75



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 8/118 (6%)

Query: 18  TTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNML 77
           T  + +A  +M+  ++R + + D    ++ GI++  D++       + +L +     ++ 
Sbjct: 38  THTLNDAKHLMEALDIRHVPIVDANK-KLLGIVSQRDLL----AAQESSLQRSAQGDSL- 91

Query: 78  SAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVI 135
            A   P+ E+M  +V  +     L E      K KIG +PV+ K  VL+  I + D +
Sbjct: 92  -AFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKD-VLVGIITDSDFV 147