Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 139 a.a., CBS domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 148 VKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE--KLVGIITSTDFVKLFGSDW 205
           VKD MT N V  + G  LKD    M   G R LPVV E+     GI+T    +    S  
Sbjct: 3   VKDIMTPNPVCISDGASLKDAHLLMQSRGVRHLPVVGEQDGHYKGILTHKKMISTVVS-- 60

Query: 206 AFNHMKTGNI-REITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGE-KL 263
             N    G + R+     ++++M T+   ++ +  L   +    E  +G LPV+D E ++
Sbjct: 61  LLNKYGQGALERKERQYLVRELMDTDAQRLSDDEPLAVVVDYFIENKLGCLPVLDKEQRV 120

Query: 264 IGLITEKDIVK 274
           +G++T  D VK
Sbjct: 121 LGIVTSSDFVK 131



 Score = 45.1 bits (105), Expect = 8e-10
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 13/130 (10%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKS-----GVLITTINERDVIKYL 138
           VK+IMT N V I +   L +   L   + +  +PV+ +      G+L        V+  L
Sbjct: 3   VKDIMTPNPVCISDGASLKDAHLLMQSRGVRHLPVVGEQDGHYKGILTHKKMISTVVSLL 62

Query: 139 K-------DQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVS-EEKLVG 190
                   ++ + + LV++ M  +    +  E L  V    + N    LPV+  E++++G
Sbjct: 63  NKYGQGALERKERQYLVRELMDTDAQRLSDDEPLAVVVDYFIENKLGCLPVLDKEQRVLG 122

Query: 191 IITSTDFVKL 200
           I+TS+DFVKL
Sbjct: 123 IVTSSDFVKL 132



 Score = 42.7 bits (99), Expect = 4e-09
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 23  EALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGG-SKYNLVKFKHNHNMLSAIN 81
           +A  +M    VR + V     G  +GILT+  ++  +    +KY     +          
Sbjct: 22  DAHLLMQSRGVRHLPVVGEQDGHYKGILTHKKMISTVVSLLNKYGQGALERKERQYL--- 78

Query: 82  EPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLK 139
             V+E+M  +   + ++  L  V+D F++ K+G +PV+DK   ++  +   D +K  K
Sbjct: 79  --VRELMDTDAQRLSDDEPLAVVVDYFIENKLGCLPVLDKEQRVLGIVTSSDFVKLCK 134



 Score = 27.7 bits (60), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 221 VRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVV---DGEKLIGLITEKDIVKCI 276
           ++++DIM  N V ++    L DA   M    +  LPVV   DG    G++T K ++  +
Sbjct: 1   MQVKDIMTPNPVCISDGASLKDAHLLMQSRGVRHLPVVGEQDGH-YKGILTHKKMISTV 58