Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 148 a.a., Predicted signal-transduction protein containing CBS domains (NCBI) from Rhodospirillum rubrum S1H

 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)

Query: 84  VKEIMTDNVVL-IKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYL--KD 140
           V +++ D  +  +       EV       KI  + V++  GVL   I ERDV   L  K 
Sbjct: 6   VPDVVRDQTIFFVSAETTAREVARTLADNKIAAVVVME-DGVLKGIITERDVTARLVAKG 64

Query: 141 QVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKL 200
              + ++ +  MT +     P +  +D  R M   G+R LPVV  E +VG+++  D   +
Sbjct: 65  GDPDSVMARAIMTPDPDTLAPEDTAEDALRMMRLRGYRHLPVVDGEGVVGMVSIRDLYAV 124

Query: 201 FGSDWAFNHMKT 212
             +D     MKT
Sbjct: 125 V-TDQLERDMKT 135



 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 144 EKLLVKDCMTENVVFATPGERL-KDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFG 202
           ++ +V D + +  +F    E   ++VART+  N    + V+ +  L GIIT  D      
Sbjct: 2   QRRIVPDVVRDQTIFFVSAETTAREVARTLADNKIAAVVVMEDGVLKGIITERDVTARLV 61

Query: 203 SDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEK 262
           +       K G   +  +V  + IM  +  ++       DA++ M       LPVVDGE 
Sbjct: 62  A-------KGG---DPDSVMARAIMTPDPDTLAPEDTAEDALRMMRLRGYRHLPVVDGEG 111

Query: 263 LIGLITEKDI 272
           ++G+++ +D+
Sbjct: 112 VVGMVSIRDL 121