Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 337 a.a., site-2 protease family protein from Methanococcus maripaludis JJ

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 83  PVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLIT-TINERDVIKYLKDQ 141
           P K+IM+ N+V +     +D+V++L ++ +  G PV++   ++ T T+NE      +   
Sbjct: 218 PAKDIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLENGNIIGTITMNE------ISST 271

Query: 142 VDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVK 199
             +   VK+ M+  V+  +P   L ++ + M      R+ VV    ++GII+ TD V+
Sbjct: 272 TAKTAKVKEIMSPPVM-VSPEAALNELIKGMANTD--RVYVVDNGNILGIISKTDIVR 326



 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)

Query: 140 DQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVK 199
           D + + +  KD M++N+V+    + + DV   ML N F   PV+    ++G IT  +   
Sbjct: 211 DTLFQDVPAKDIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLENGNIIGTITMNEI-- 268

Query: 200 LFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD 259
                 +    KT  ++EI +           V V+    L + IK M   N   + VVD
Sbjct: 269 ------SSTTAKTAKVKEIMSPP---------VMVSPEAALNELIKGM--ANTDRVYVVD 311

Query: 260 GEKLIGLITEKDIVKCI 276
              ++G+I++ DIV+ +
Sbjct: 312 NGNILGIISKTDIVRTL 328