Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 138 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.4 bits (124), Expect = 5e-12
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQ-- 141
           +++ M    VL++ N+ L   ++  +     G  V+D SG L+  ++++D +  +     
Sbjct: 6   IRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAVMLKSSY 65

Query: 142 -VDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVK 199
             D   +VKDCM   V++  P E +  +A  ML    +  PVV   K++G I  T+ ++
Sbjct: 66  HCDLTSVVKDCMRTEVLYVGPDESILQLAEQMLGAKPKIYPVVDNGKVIGTINRTNVLR 124



 Score = 35.8 bits (81), Expect = 5e-07
 Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 144 EKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKLFG 202
           + + ++D M    V       L      +L N      VV +   LVG ++  D + +  
Sbjct: 2   DSIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAVM- 60

Query: 203 SDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEK 262
                  +K+    ++T+V ++D M+T ++ V  +  ++   ++M      + PVVD  K
Sbjct: 61  -------LKSSYHCDLTSV-VKDCMRTEVLYVGPDESILQLAEQMLGAKPKIYPVVDNGK 112

Query: 263 LIGLITEKDIVKCI 276
           +IG I   ++++ +
Sbjct: 113 VIGTINRTNVLRAM 126