Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 4e-14
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 146 LLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDW 205
           +++ D M   VV     +RL        +  F  L V+ E KL G+++  D ++    + 
Sbjct: 3   IIIADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAISPNL 62

Query: 206 AFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIG 265
             N  +T    E    RI  +M  N V+V   + L  A + + E NIG LPV++   L+G
Sbjct: 63  G-NGAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLENGDLVG 121

Query: 266 LITEKDIVK 274
           ++T KD+++
Sbjct: 122 IVTWKDLLR 130



 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYL----- 138
           + +IM   VV ++ +  L    D+F +     + V+D+   L   ++ERD+++ +     
Sbjct: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYK-LEGVLSERDLLRAISPNLG 63

Query: 139 ------KDQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGII 192
                 KD    +  +   MT N V   P   L   +RT+L +    LPV+    LVGI+
Sbjct: 64  NGAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLENGDLVGIV 123

Query: 193 TSTDFVKLF 201
           T  D ++ +
Sbjct: 124 TWKDLLRAY 132



 Score = 35.8 bits (81), Expect = 5e-07
 Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 11  KVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKF 70
           +V  V    ++  A  + ++ N   + V D    ++EG+L+  D++  +      NL   
Sbjct: 12  RVVTVEMDDRLTVAKDIFEQANFHHLLVLDEY--KLEGVLSERDLLRAISP----NLGNG 65

Query: 71  KHNHNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTIN 130
                 L  + + + ++MT N V +   V LD      ++  IG +PV++ +G L+  + 
Sbjct: 66  AETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLE-NGDLVGIVT 124

Query: 131 ERDVIK 136
            +D+++
Sbjct: 125 WKDLLR 130



 Score = 33.9 bits (76), Expect = 2e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query: 223 IQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCI 276
           I DIM T +V+V  + +L  A     + N   L V+D  KL G+++E+D+++ I
Sbjct: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAI 58