Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 147 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Paraburkholderia bryophila 376MFSha3.1

 Score = 48.9 bits (115), Expect = 6e-11
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 92  VVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIK--YLKDQVDEKLLVK 149
           V  I+ +  + E I L  +K IG + V D   +    + ERD  +   L D+  +   V+
Sbjct: 17  VYTIRADDSVYEAIKLMAEKGIGALVVTDGDSIA-GIVTERDYARKVVLMDRSSKATPVR 75

Query: 150 DCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVK 199
           + M++ V F  P +   D    M     R LPV+  ++LVG+++  D VK
Sbjct: 76  EIMSKAVRFVRPEQTTDDCMALMTERRMRHLPVIENDRLVGMVSIGDLVK 125



 Score = 38.9 bits (89), Expect = 6e-08
 Identities = 16/46 (34%), Positives = 29/46 (63%)

Query: 229 TNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVK 274
           T + ++ ++  + +AIK M E  IG L V DG+ + G++TE+D  +
Sbjct: 15  TTVYTIRADDSVYEAIKLMAEKGIGALVVTDGDSIAGIVTERDYAR 60



 Score = 35.8 bits (81), Expect = 5e-07
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 12/111 (10%)

Query: 167 DVARTMLRNGFRRLPVVSEEKLVGIITSTDFV-KLFGSDWAFNHMKTGNIREITNVRIQD 225
           +  + M   G   L V   + + GI+T  D+  K+   D           R      +++
Sbjct: 28  EAIKLMAEKGIGALVVTDGDSIAGIVTERDYARKVVLMD-----------RSSKATPVRE 76

Query: 226 IMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCI 276
           IM   +  V       D +  M E  +  LPV++ ++L+G+++  D+VK I
Sbjct: 77  IMSKAVRFVRPEQTTDDCMALMTERRMRHLPVIENDRLVGMVSIGDLVKNI 127



 Score = 30.8 bits (68), Expect = 2e-05
 Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 16/134 (11%)

Query: 3   IKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGG 62
           +KT      V  +     + EA+ +M ++ +  + V D  +  + GI+T  D        
Sbjct: 8   LKTKPNNTTVYTIRADDSVYEAIKLMAEKGIGALVVTDGDS--IAGIVTERDYA------ 59

Query: 63  SKYNLVKFKHNHNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKS 122
            K  L+         S+   PV+EIM+  V  ++     D+ + L  ++++  +PVI+  
Sbjct: 60  RKVVLMD-------RSSKATPVREIMSKAVRFVRPEQTTDDCMALMTERRMRHLPVIEND 112

Query: 123 GVLITTINERDVIK 136
             L+  ++  D++K
Sbjct: 113 R-LVGMVSIGDLVK 125