Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 230 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 24/142 (16%)

Query: 86  EIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEK 145
           ++MT +V+ +  +  + EV  +FV   I G PV+D  G LI  I+E D+++  +   DE+
Sbjct: 5   DVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDER 64

Query: 146 ------------------------LLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLP 181
                                     V+D M+  VV   PG  L +VA  +     +R+P
Sbjct: 65  SRTSWLDHLWSASHEARDYIKTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRVP 124

Query: 182 VVSEEKLVGIITSTDFVKLFGS 203
           V    +LVGI++  + V+   S
Sbjct: 125 VTEAGRLVGIVSRANLVQALAS 146



 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 15/141 (10%)

Query: 150 DCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKL--FGSD-- 204
           D MT +V+   P   +++VA+  + NG    PV+  +  L+G+I+  D ++    G+D  
Sbjct: 5   DVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDER 64

Query: 205 ---------WAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVL 255
                    W+ +H     I+     +++D+M T +V+V     L +    +    I  +
Sbjct: 65  SRTSWLDHLWSASHEARDYIKTHAT-KVRDVMSTEVVTVQPGTPLGEVASILETRRIKRV 123

Query: 256 PVVDGEKLIGLITEKDIVKCI 276
           PV +  +L+G+++  ++V+ +
Sbjct: 124 PVTEAGRLVGIVSRANLVQAL 144



 Score = 30.0 bits (66), Expect = 5e-05
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 221 VRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGE-KLIGLITEKDIVK 274
           +R  D+M  +++SV  +  + +  K   +  I   PV+D +  LIG+I+E D+++
Sbjct: 1   MRASDVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLR 55