Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 138 a.a., signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQ-- 141
           +++ M    VL++ N+ L   ++  +     G  V+D +G L+  ++++D +  +     
Sbjct: 6   IRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVMLKSSY 65

Query: 142 -VDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVK 199
             D   +VKDCM   V++  P + +  +A  ML +  +  PVV + K+VG I  T+ ++
Sbjct: 66  HCDMTSVVKDCMRTEVLYVGPDDSILQLAEQMLGSKPKIYPVVEQGKVVGTINRTNVLR 124



 Score = 32.0 bits (71), Expect = 7e-06
 Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 144 EKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKLFG 202
           + + ++D M    V       L      +L N      VV +   LVG ++  D + +  
Sbjct: 2   DSIKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVM- 60

Query: 203 SDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEK 262
                  +K+    ++T+V ++D M+T ++ V  +  ++   ++M      + PVV+  K
Sbjct: 61  -------LKSSYHCDMTSV-VKDCMRTEVLYVGPDDSILQLAEQMLGSKPKIYPVVEQGK 112

Query: 263 LIGLITEKDIVKCI 276
           ++G I   ++++ +
Sbjct: 113 VVGTINRTNVLRAM 126