Pairwise Alignments

Query, 80 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 1176 a.a., pyruvate:ferredoxin (flavodoxin) oxidoreductase from Rahnella sp. WP5

 Score = 39.7 bits (91), Expect = 7e-08
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 8   PEKCHGCGNCVVACPVNAQDPDV----YGGKGPSSDEKL-----IMRVENGVVSIVNGDL 58
           P+ C  C +CV ACP +A    V    +    PS+ + L      MR +  V+ +   D 
Sbjct: 686 PDLCTQCNHCVAACPHSAIRAKVVQPEFMADAPSALQSLDVKSRDMRGQKYVLQVAPED- 744

Query: 59  CGGCGACIEACP 70
           C GC  C+E CP
Sbjct: 745 CTGCNLCVEVCP 756



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 20  ACPVNAQDPDVYGGKGPSSDEKLIMRVENGVVSIVNGDLCGGCGACIEACPVDAIKLVIV 79
           A PV+A  PD     G +  EK  +  E   V I   DLC  C  C+ ACP  AI+  +V
Sbjct: 653 ALPVSAFPPDGTWPTGTTQWEKRNIAEE---VPIWKPDLCTQCNHCVAACPHSAIRAKVV 709

Query: 80  K 80
           +
Sbjct: 710 Q 710



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 2   YKLKVYPEKCHGCGNCVVACPV-NAQDPDV 30
           Y L+V PE C GC  CV  CP  + QDP +
Sbjct: 736 YVLQVAPEDCTGCNLCVEVCPAKDRQDPSI 765