Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 188 a.a., NADH:ubiquinone oxidoreductase subunit 6 (chain I) from Sinorhizobium meliloti 1021

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)

Query: 145 GEITIKKDD-----CVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKV 199
           G   +K+DD     CV C +CA  CP D IE++P +    +  P A  +ID   C++C +
Sbjct: 54  GHHFLKRDDEGEIKCVACELCARICPCDCIEVVPYEDEKGNRRP-AKFEIDTARCLFCGL 112

Query: 200 CEKACPHNAI 209
           CE ACP +AI
Sbjct: 113 CEDACPADAI 122



 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 25  LKWDD---CTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDI-SEKCVLCGMCACA 80
           LK DD     CV C +C+ ICP   IE+ P     KG+    K +I + +C+ CG+C  A
Sbjct: 58  LKRDDEGEIKCVACELCARICPCDCIEVVPYEDE-KGNRRPAKFEIDTARCLFCGLCEDA 116

Query: 81  CPFDAVKL 88
           CP DA+ L
Sbjct: 117 CPADAIAL 124



 Score = 50.1 bits (118), Expect = 5e-11
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 104 IKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEY 163
           +KR  E  + KCV CE C  +CP   I+V     E+ +    +  I    C+ CG+C + 
Sbjct: 58  LKRDDE-GEIKCVACELCARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDA 116

Query: 164 CPADAIEL 171
           CPADAI L
Sbjct: 117 CPADAIAL 124



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 271 EPACNACGACISVCPCNAL-VFPQPEKQGDKVP-NVVVNQDVCILCGACTHSCPVDALTV 328
           E  C AC  C  +CPC+ + V P  +++G++ P    ++   C+ CG C  +CP DA+ +
Sbjct: 65  EIKCVACELCARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAIAL 124



 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 9/71 (12%)

Query: 194 CVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICP 253
           CV C++C + CP + IE + Y+    ++  +P  +        ID   C+ CG C + CP
Sbjct: 68  CVACELCARICPCDCIEVVPYEDEKGNR--RPAKF-------EIDTARCLFCGLCEDACP 118

Query: 254 ADAIEVEKPFE 264
           ADAI + + +E
Sbjct: 119 ADAIALGQQYE 129



 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 9/60 (15%)

Query: 242 CVSCGWCANICPADAIEVEKPFEGE--------LIIDEPACNACGACISVCPCNALVFPQ 293
           CV+C  CA ICP D IEV  P+E E          ID   C  CG C   CP +A+   Q
Sbjct: 68  CVACELCARICPCDCIEVV-PYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAIALGQ 126



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 28  DDCTCVGCGICSEICPTSAIEMG 50
           D   C+ CG+C + CP  AI +G
Sbjct: 103 DTARCLFCGLCEDACPADAIALG 125