Pairwise Alignments
Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 166 a.a., 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) from Rhodospirillum rubrum S1H
Score = 47.4 bits (111), Expect = 3e-10
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 94 PITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDD 153
P + P + + +++ CV C+ CE VCP AI E E PE ++ T
Sbjct: 21 PTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGAIRFE-ERPEGLRFMIWHNT----- 74
Query: 154 CVLCGICAEYCPADAIEL 171
CV CG+C+ YC AI+L
Sbjct: 75 CVNCGLCSHYCLTKAIKL 92
Score = 42.7 bits (99), Expect = 6e-09
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 232 KGQTNIDKELCVSCGWCANICPADAIEVEKPFEG-ELIIDEPACNACGACISVCPCNAL 289
+G+ D+ CV C C ++CP AI E+ EG +I C CG C C A+
Sbjct: 32 RGKVTFDETACVGCKMCEHVCPGGAIRFEERPEGLRFMIWHNTCVNCGLCSHYCLTKAI 90
Score = 42.7 bits (99), Expect = 6e-09
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 27 WDDCTCVGCGICSEICPTSAI--EMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFD 84
+D+ CVGC +C +CP AI E P G F + CV CG+C+ C
Sbjct: 37 FDETACVGCKMCEHVCPGGAIRFEERPEGLRF--------MIWHNTCVNCGLCSHYCLTK 88
Query: 85 AVKLS 89
A+KLS
Sbjct: 89 AIKLS 93
Score = 42.4 bits (98), Expect = 8e-09
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 263 FEGELIIDEPACNACGACISVCPCNALVFPQ-PEKQGDKVPNVVVNQDVCILCGACTHSC 321
+ G++ DE AC C C VCP A+ F + PE ++ + C+ CG C+H C
Sbjct: 31 YRGKVTFDETACVGCKMCEHVCPGGAIRFEERPEGL-----RFMIWHNTCVNCGLCSHYC 85
Query: 322 PVDAL 326
A+
Sbjct: 86 LTKAI 90
Score = 38.9 bits (89), Expect = 9e-08
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 27/104 (25%)
Query: 187 IKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCG 246
+ D ACV CK+CE CP AI ++PE + I CV+CG
Sbjct: 35 VTFDETACVGCKMCEHVCPGGAIRF----------EERPEGL-----RFMIWHNTCVNCG 79
Query: 247 WCANICPADAIEVEKPFE------------GELIIDEPACNACG 278
C++ C AI++ + + ++ AC+ CG
Sbjct: 80 LCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACSGCG 123