Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase, chain I from Dechlorosoma suillum PS

 Score = 52.4 bits (124), Expect = 8e-12
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 75  GMCACACPFDAVKLSINDKPITEMPQYPKIK-----RGIELNQSKCVLCEQCELVCPQCA 129
           GM      F A K+++   P  + PQ  + +     R     + +C+ C+ CE VCP  A
Sbjct: 19  GMSVTGRYFFARKITVQ-YPEEKTPQSARFRGLHALRRYPNGEERCIACKLCEAVCPAMA 77

Query: 130 IDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAI 169
           I +E    +  S       I    C+ CG C E CP DAI
Sbjct: 78  ITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI 117



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 151 KDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIE 210
           ++ C+ C +C   CPA AI +     +  S        IDL  C++C  CE+ACP +AI 
Sbjct: 60  EERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTR-YDIDLTKCIFCGFCEEACPVDAI- 117

Query: 211 AICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCG 246
                     + +  E +GE +G     K++ ++ G
Sbjct: 118 ---------VETRIFEYHGEKRGDLYYTKQMLLANG 144



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 271 EPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDV--CILCGACTHSCPVDALTV 328
           E  C AC  C +VCP  A+     ++          + D+  CI CG C  +CPVDA+  
Sbjct: 60  EERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAIVE 119

Query: 329 KR 330
            R
Sbjct: 120 TR 121



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 32  CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDIS-EKCVLCGMCACACPFDAVKLSI 90
           C+ C +C  +CP  AI +        G     + DI   KC+ CG C  ACP DA+    
Sbjct: 63  CIACKLCEAVCPAMAITI-EAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI---- 117

Query: 91  NDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPER 139
                T + +Y   KRG +L  +K +L    +    Q A D E +   R
Sbjct: 118 ---VETRIFEYHGEKRG-DLYYTKQMLLANGDRYEAQIAADREADAKFR 162



 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANI 251
           + C+ CK+CE  CP  AI     +    S+            + +ID   C+ CG+C   
Sbjct: 61  ERCIACKLCEAVCPAMAITIEAAQRDDGSRRTT---------RYDIDLTKCIFCGFCEEA 111

Query: 252 CPADAIEVEKPFE 264
           CP DAI   + FE
Sbjct: 112 CPVDAIVETRIFE 124



 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 12/73 (16%)

Query: 239 KELCVSCGWCANICPADAIEVEKPFEGE-------LIIDEPACNACGACISVCPCNALVF 291
           +E C++C  C  +CPA AI +E     +         ID   C  CG C   CP +A+V 
Sbjct: 60  EERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAIVE 119

Query: 292 PQ-----PEKQGD 299
            +      EK+GD
Sbjct: 120 TRIFEYHGEKRGD 132



 Score = 37.0 bits (84), Expect = 3e-07
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)

Query: 69  EKCVLCGMCACACPFDAVKLSI--NDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCP 126
           E+C+ C +C   CP  A+ +     D       +Y       +++ +KC+ C  CE  CP
Sbjct: 61  ERCIACKLCEAVCPAMAITIEAAQRDDGSRRTTRY-------DIDLTKCIFCGFCEEACP 113

Query: 127 QCAIDVEREVPERKSLVLGEITIKK 151
             AI VE  + E      G++   K
Sbjct: 114 VDAI-VETRIFEYHGEKRGDLYYTK 137