Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 1215 a.a., pyruvate flavodoxin/ferredoxin oxidoreductase domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 194 CVYCKVCEKACPHNAIEAICYKCP---------LASKIKKPELYGEIKGQTNIDKELCVS 244
           C+ C  C   CPH AI  I              +A + K  EL G +K +  +  + C+ 
Sbjct: 688 CIQCNQCSFVCPHAAIRPILASDEELAGAPASFVAIEAKGKELNG-LKYRMQVYAQDCMG 746

Query: 245 CGWCANICPA-DAIEVEKPFEGEL 267
           CG CA++CPA +   V KP E ++
Sbjct: 747 CGSCADVCPAKNKALVMKPIETQM 770



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 24/106 (22%)

Query: 105 KRGIELN-----QSKCVLCEQCELVCPQCAID------------------VEREVPERKS 141
           KRG+ +         C+ C QC  VCP  AI                   +E +  E   
Sbjct: 673 KRGVAITVPEWLSENCIQCNQCSFVCPHAAIRPILASDEELAGAPASFVAIEAKGKELNG 732

Query: 142 LVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADI 187
           L    + +   DC+ CG CA+ CPA    L+   +     + +A++
Sbjct: 733 LKY-RMQVYAQDCMGCGSCADVCPAKNKALVMKPIETQMADQVANL 777



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 24/98 (24%)

Query: 8   ENDGVIEISRSGVEKR-----VLKWDDCTCVGCGICSEICPTSAI--------EMGPLGA 54
           E DG+  +  +  EKR     V +W    C+ C  CS +CP +AI        E+    A
Sbjct: 659 EPDGLFPVGTAAFEKRGVAITVPEWLSENCIQCNQCSFVCPHAAIRPILASDEELAGAPA 718

Query: 55  IFKGDIDAPKLDI----------SEKCVLCGMCACACP 82
            F   I+A   ++          ++ C+ CG CA  CP
Sbjct: 719 SFVA-IEAKGKELNGLKYRMQVYAQDCMGCGSCADVCP 755



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 15/100 (15%)

Query: 240 ELCVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALVFPQPEKQGD 299
           E C+ C  C+ +CP  AI   +P    L  DE    A  + +      A+     E  G 
Sbjct: 686 ENCIQCNQCSFVCPHAAI---RPI---LASDEELAGAPASFV------AIEAKGKELNGL 733

Query: 300 KVPNVVVNQDVCILCGACTHSCPV--DALTVKRTKINMTE 337
           K    V  QD C+ CG+C   CP    AL +K  +  M +
Sbjct: 734 KYRMQVYAQD-CMGCGSCADVCPAKNKALVMKPIETQMAD 772