Pairwise Alignments
Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 114 bits (285), Expect = 3e-30
Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 59/247 (23%)
Query: 68 SEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQ 127
S KC+ C +C CP DA+K P +K E+ KCV CE C CP
Sbjct: 45 SNKCIRCELCYEVCPVDAIK-------------EPSVKSPAEIIPEKCVKCEICAKTCPV 91
Query: 128 CAIDV-----------------EREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIE 170
AI+V E +V RK + L + + ++ C+ CGIC +CP AI
Sbjct: 92 GAINVLEGRAKLEEDTVVYELKEIDVTHRK-IRLVKHELDEESCIKCGICERFCPTSAIT 150
Query: 171 LIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGE 230
+ + I I+LD C+ C CEK CP +A IK GE
Sbjct: 151 VEKRN----------SIDINLDLCMGCTACEKVCPKSA-------------IKVENEMGE 187
Query: 231 I--KGQTNIDKELCVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNA 288
I + + +++ + C++C C+ ICP AI E +G + +D+ C CG C CP A
Sbjct: 188 ITAENEISLNNDTCINCMVCSEICPVGAIVYE---DGLMKLDDKMCIFCGKCEKNCPVTA 244
Query: 289 LVFPQPE 295
+ Q +
Sbjct: 245 IAIKQKD 251
Score = 108 bits (271), Expect = 1e-28
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 54/247 (21%)
Query: 104 IKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEY 163
++R + + +KC+ CE C VCP AI ++ V I + CV C ICA+
Sbjct: 37 VERNLYVESNKCIRCELCYEVCPVDAI--------KEPSVKSPAEIIPEKCVKCEICAKT 88
Query: 164 CPADAIELIPNDMNALSLNPIADIK---------------IDLDACVYCKVCEKACPHNA 208
CP AI ++ + ++K +D ++C+ C +CE+ CP +A
Sbjct: 89 CPVGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSA 148
Query: 209 IEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVEKPF----- 263
I E + +I+ +LC+ C C +CP AI+VE
Sbjct: 149 ITV------------------EKRNSIDINLDLCMGCTACEKVCPKSAIKVENEMGEITA 190
Query: 264 EGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPV 323
E E+ ++ C C C +CP A+V+ + D +CI CG C +CPV
Sbjct: 191 ENEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLD--------DKMCIFCGKCEKNCPV 242
Query: 324 DALTVKR 330
A+ +K+
Sbjct: 243 TAIAIKQ 249
Score = 108 bits (270), Expect = 1e-28
Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 50/241 (20%)
Query: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVKL--- 88
C+ C +C E+CP AI+ + + +P I EKCV C +CA CP A+ +
Sbjct: 48 CIRCELCYEVCPVDAIK--------EPSVKSPAEIIPEKCVKCEICAKTCPVGAINVLEG 99
Query: 89 ---SINDKPITEMPQYPKIKRGI-----ELNQSKCVLCEQCELVCPQCAIDVEREVPERK 140
D + E+ + R I EL++ C+ C CE CP AI VE+
Sbjct: 100 RAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKR----- 154
Query: 141 SLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVC 200
I I D C+ C C + CP AI+ + N+M ++ +I ++ D C+ C VC
Sbjct: 155 ----NSIDINLDLCMGCTACEKVCPKSAIK-VENEMGEITAE--NEISLNNDTCINCMVC 207
Query: 201 EKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVE 260
+ CP + AI Y+ G +D ++C+ CG C CP AI ++
Sbjct: 208 SEICP---VGAIVYE----------------DGLMKLDDKMCIFCGKCEKNCPVTAIAIK 248
Query: 261 K 261
+
Sbjct: 249 Q 249
Score = 73.9 bits (180), Expect = 4e-18
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 5 KKDENDGVIEISRSGVEKRVLKW-----DDCTCVGCGICSEICPTSAIEMGPLGAIFKGD 59
K +E+ V E+ V R ++ D+ +C+ CGIC CPTSAI + +I D
Sbjct: 102 KLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSI---D 158
Query: 60 IDAPKLDISEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCE 119
I+ LD+ C+ C C CP A+K+ IT + I LN C+ C
Sbjct: 159 IN---LDL---CMGCTACEKVCPKSAIKVENEMGEIT-------AENEISLNNDTCINCM 205
Query: 120 QCELVCPQCAIDVEREVPERKSLVLGEITIKKDD--CVLCGICAEYCPADAIELIPNDM 176
C +CP AI V + +K DD C+ CG C + CP AI + DM
Sbjct: 206 VCSEICPVGAI------------VYEDGLMKLDDKMCIFCGKCEKNCPVTAIAIKQKDM 252
Score = 67.0 bits (162), Expect = 5e-16
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 47/177 (26%)
Query: 186 DIKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSC 245
++ ++ + C+ C++C + CP +AI K+P +K I E CV C
Sbjct: 40 NLYVESNKCIRCELCYEVCPVDAI-------------KEPS----VKSPAEIIPEKCVKC 82
Query: 246 GWCANICPADAIEV---EKPFEGELII--------------------DEPACNACGACIS 282
CA CP AI V E + ++ DE +C CG C
Sbjct: 83 EICAKTCPVGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICER 142
Query: 283 VCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTVKRTKINMTEAN 339
CP +A+ +K ++ +N D+C+ C AC CP A+ V+ +T N
Sbjct: 143 FCPTSAITV-------EKRNSIDINLDLCMGCTACEKVCPKSAIKVENEMGEITAEN 192
Score = 50.8 bits (120), Expect = 4e-11
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 221 KIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIE---VEKPFEGELIIDEPACNAC 277
K K +L ++ ++ C+ C C +CP DAI+ V+ P E II E C C
Sbjct: 27 KEKLKDLMVPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAE---IIPE-KCVKC 82
Query: 278 GACISVCPCNAL--VFPQPEKQGDKVPNVVVNQDV----------------CILCGACTH 319
C CP A+ + + + + D V + DV CI CG C
Sbjct: 83 EICAKTCPVGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICER 142
Query: 320 SCPVDALTV-KRTKINM 335
CP A+TV KR I++
Sbjct: 143 FCPTSAITVEKRNSIDI 159
Score = 46.2 bits (108), Expect = 9e-10
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 262 PFEGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSC 321
P E L ++ C C C VCP +A+ P + + +P + C+ C C +C
Sbjct: 36 PVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIP------EKCVKCEICAKTC 89
Query: 322 PVDALTVKRTKINMTE 337
PV A+ V + + E
Sbjct: 90 PVGAINVLEGRAKLEE 105