Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Paraburkholderia graminis OAS925

 Score = 55.8 bits (133), Expect = 7e-13
 Identities = 24/64 (37%), Positives = 32/64 (50%)

Query: 106 RGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCP 165
           R  E  + +C+ C+ CE VCP  AI +E E  E  +       I    C+ CG C E CP
Sbjct: 54  RRYENGEERCIACKLCEAVCPALAITIESETREDNTRRTTRYDIDLTKCIFCGFCEESCP 113

Query: 166 ADAI 169
            D+I
Sbjct: 114 VDSI 117



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 151 KDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIE 210
           ++ C+ C +C   CPA AI  I ++    +        IDL  C++C  CE++CP ++I 
Sbjct: 60  EERCIACKLCEAVCPALAIT-IESETREDNTRRTTRYDIDLTKCIFCGFCEESCPVDSI- 117

Query: 211 AICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCG 246
                     +    E +GE +G     K++ ++ G
Sbjct: 118 ---------VETHILEYHGEKRGDLYFTKDMLLAVG 144



 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 271 EPACNACGACISVCPCNALVFPQPEKQGD--KVPNVVVNQDVCILCGACTHSCPVDAL 326
           E  C AC  C +VCP  A+      ++ +  +     ++   CI CG C  SCPVD++
Sbjct: 60  EERCIACKLCEAVCPALAITIESETREDNTRRTTRYDIDLTKCIFCGFCEESCPVDSI 117



 Score = 40.0 bits (92), Expect = 4e-08
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKEL--CVSCGWCA 249
           + C+ CK+CE  CP            LA  I+        +  T  D +L  C+ CG+C 
Sbjct: 61  ERCIACKLCEAVCP-----------ALAITIESETREDNTRRTTRYDIDLTKCIFCGFCE 109

Query: 250 NICPADAI 257
             CP D+I
Sbjct: 110 ESCPVDSI 117



 Score = 39.7 bits (91), Expect = 5e-08
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 239 KELCVSCGWCANICPADAIEVEKPFEGE-------LIIDEPACNACGACISVCPCNALVF 291
           +E C++C  C  +CPA AI +E     +         ID   C  CG C   CP +++V 
Sbjct: 60  EERCIACKLCEAVCPALAITIESETREDNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVE 119

Query: 292 PQ-PEKQGDKVPNVVVNQDVCILCG 315
               E  G+K  ++   +D+ +  G
Sbjct: 120 THILEYHGEKRGDLYFTKDMLLAVG 144



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 69  EKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQC 128
           E+C+ C +C   CP     L+I  +  T      +  R  +++ +KC+ C  CE  CP  
Sbjct: 61  ERCIACKLCEAVCP----ALAITIESETREDNTRRTTR-YDIDLTKCIFCGFCEESCPVD 115

Query: 129 AIDVEREVPERKSLVLGEITIKKDDCVLCG 158
           +I VE  + E      G++   KD  +  G
Sbjct: 116 SI-VETHILEYHGEKRGDLYFTKDMLLAVG 144



 Score = 37.4 bits (85), Expect = 3e-07
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 12/61 (19%)

Query: 32  CVGCGICSEICPTSAIEMGP------LGAIFKGDIDAPKLDISEKCVLCGMCACACPFDA 85
           C+ C +C  +CP  AI +             + DID  K      C+ CG C  +CP D+
Sbjct: 63  CIACKLCEAVCPALAITIESETREDNTRRTTRYDIDLTK------CIFCGFCEESCPVDS 116

Query: 86  V 86
           +
Sbjct: 117 I 117



 Score = 23.9 bits (50), Expect = 0.003
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 308 QDVCILCGACTHSCPVDALTVK 329
           ++ CI C  C   CP  A+T++
Sbjct: 60  EERCIACKLCEAVCPALAITIE 81