Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 257 a.a., L-Arginine ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2C3

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 16/253 (6%)

Query: 9   IILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPPTIYEE-NGNLAGFDFDLMNEIAK 67
           ++LL  L++S++S             L +G+ A YPP   +  +G++ GFD+D+ N + +
Sbjct: 4   LVLLGALALSVLS----LPTFADEKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCE 59

Query: 68  RMNLNTDFKIYNSKSELFDALEKNEVDCI-GSRTVNYERRKFVDFTRVYYYDSVRVAVPE 126
            M +   + +      L  AL+  ++D I  S ++  +R+K VDFT  YY    R+ +  
Sbjct: 60  EMKVKCVW-VEQEFDGLIPALKVRKIDAILSSMSITEDRKKSVDFTNKYYNTPARLVMKA 118

Query: 127 SSSVT-LLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVDAV 185
            + V+  L ELKGKN+GV  GS+        L  +G +   Y +   +   V  G +D  
Sbjct: 119 GTQVSDNLAELKGKNIGVQRGSIHERFAREVLAPLGAEIKPYGSQNEIYLDVAAGRLDGT 178

Query: 186 IGHEMYLEHISTKCNVQK-------RYLDEKLSVSYWAIPINKNNPNLRNSINDILLEME 238
           +     L+    K +  K        + DEK       I + K +  L++ IN  +  + 
Sbjct: 179 VADATLLDDGFLKTDAGKGFAFVGPAFTDEKYFGDGIGIAVRKGDA-LKDKINGAITALR 237

Query: 239 NDGTLDELKLKWY 251
            +G   +++ K++
Sbjct: 238 ENGKYKQIQDKYF 250