Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  183 bits (464), Expect = 3e-51
 Identities = 97/248 (39%), Positives = 149/248 (60%), Gaps = 5/248 (2%)

Query: 8   IIILLFLLSISIISGCISSQ----NTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMN 63
           ++I+  +L ++  SGCISS     NT+  G LTVG+  + PP  Y E G L GFD DLM 
Sbjct: 7   LVIISSVLILTSFSGCISSYGKEYNTVTPGVLTVGITPEMPPQQYYEEGELKGFDIDLMK 66

Query: 64  EIAKRMNLNTDFKIYNSKSELFDALEKNEVDCIGSRTVNYERRKFVDFTRVYYYDSVRVA 123
           EIA  M L  +FKIY       +AL   E+DC+ S T++ ER++ +DF+R Y    V VA
Sbjct: 67  EIANNMGLKPEFKIYEYGGA-HEALLNGEIDCLPSMTISPERKEDMDFSRAYIQTYVVVA 125

Query: 124 VPESSSVTLLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVD 183
           V E+S    LK+L GKN+ V+  + + +  + YL +I      YD+ + L + + +  +D
Sbjct: 126 VFENSPYRELKDLNGKNIAVVTNTYTEDWAKDYLGSINANIKSYDSIQGLVSDIYSKNID 185

Query: 184 AVIGHEMYLEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDILLEMENDGTL 243
           AV+  ++ L++ S + + + R + EK+++ YWAI + K+N +L+N IND L E+E +  L
Sbjct: 186 AVVTDQIQLDYYSKQKSFESRLIFEKMTIEYWAIAVKKDNHDLQNEINDALFELEENEAL 245

Query: 244 DELKLKWY 251
            ELK KWY
Sbjct: 246 YELKNKWY 253