Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  159 bits (401), Expect = 6e-44
 Identities = 88/241 (36%), Positives = 140/241 (58%), Gaps = 8/241 (3%)

Query: 9   IILLFLLSISIISGCISSQN---TMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEI 65
           +++  +L +     CISS +   T+K G LTVGV    PP +YEENG L G++ DL++EI
Sbjct: 4   MVIFSVLLVITSCACISSDSNPTTLKEGVLTVGVFKYVPPAVYEENGELKGYEVDLISEI 63

Query: 66  AKRMNLNTDFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFVDFTRVYYYDSVRVAV 124
           AKRM+L  ++K Y   S+L +A+  NEVDC I    V  ER K V F+R Y    + + +
Sbjct: 64  AKRMDLKVEYKEYRF-SDLLNAVANNEVDCAISDLAVTPEREKIVSFSRAYSKTDIILVI 122

Query: 125 PESSSVTLLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVDA 184
           P+ S +  L ++ G+ +GV  G++  +     L +I  +   Y T + L +A+E+G VDA
Sbjct: 123 PKDSDIEKLTDIVGQKVGVTAGTIDDDKSSELLKSIDFQVCRYATHDELYDALESGNVDA 182

Query: 185 VIGHEMYLEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDILLEMENDGTLD 244
           +I  +    +  T  N   + L+E ++  Y  I +NKNN  L++ INDI+LE+E +G  +
Sbjct: 183 IISEK---NNFDTVQNSGIKCLNEPIATIYSGIAVNKNNKELKSKINDIILELEQEGYFN 239

Query: 245 E 245
           +
Sbjct: 240 Q 240