Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  142 bits (359), Expect = 5e-39
 Identities = 81/243 (33%), Positives = 135/243 (55%), Gaps = 2/243 (0%)

Query: 9   IILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEIAKR 68
           I+++  + + I SGC           L VG C    PT Y E+G   GF+ +L+ EI+KR
Sbjct: 6   ILIISTIFLIIFSGCTEKNTESNNRVLNVGACTDLAPTSYLEDGEFKGFEVELIYEISKR 65

Query: 69  MNLNTDFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFVDFTRVYYYDSVRVAVPES 127
           ++L  +F  Y S SEL DA+ +  VDC IG      ER+  +DF+R Y Y    + V ++
Sbjct: 66  LDLKPEFIAY-SFSELLDAVSEGNVDCGIGYIGRTPERQLKMDFSRQYAYTYSSILVKQN 124

Query: 128 SSVTLLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVDAVIG 187
           S    +K L+ K++GV++ S+  + +ES   ++    + Y+   ++   + +G++D+ + 
Sbjct: 125 SECVGIKCLEHKSVGVLKDSIEEKWLESLSKSMDFDIISYENQNDIHKDLLSGKIDSEVT 184

Query: 188 HEMYLEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDILLEMENDGTLDELK 247
             +   ++  K N + + + +K  + Y AI I+  NP L+ SI+  LLEMENDGTL +LK
Sbjct: 185 DHLTSLYLIQKYNSELKIIGDKFDIIYIAIAIDNTNPELKKSIDAALLEMENDGTLVKLK 244

Query: 248 LKW 250
            KW
Sbjct: 245 EKW 247