Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 282 a.a., ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 79.7 bits (195), Expect = 6e-20
 Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 11/212 (5%)

Query: 36  GVLTVGITPEMPPQQYY-EDGELKGFDIDLMKEIANNMGLKPE---FKIYEYGGAHEALL 91
           G L VG      P  +   DG+L+GFDID+ + +A  +   PE   F +         LL
Sbjct: 39  GKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDPEKVEFVVQSSDARIPNLL 98

Query: 92  NGEIDC-LPSMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRELKDLNGKN----IAVV 146
             ++D     +T++  R + + F+  Y +  V + +  NS Y+E++DL        +AV+
Sbjct: 99  TDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPANSKYKEIEDLKAAGDDVTVAVL 158

Query: 147 TNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVYSGNIDAVVTDQIQLDYYSKQNNFESR 206
            N Y E+   + L    A +  YDSV+ +   V SG  DA  TDQ  + Y   QN    R
Sbjct: 159 QNVYAEELVHQALPK--AKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYR 216

Query: 207 LIFEKMTIEYWAIAVKKDNHNLQNEINDVLFE 238
                 + + +A AVK+ + +  N +N  L E
Sbjct: 217 SPAYAWSPQTYACAVKRGDQDWLNFVNTTLHE 248