Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 257 a.a., L-Arginine ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2C3

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 11/226 (4%)

Query: 38  LTVGITPEMPP-QQYYEDGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEID 96
           L +GI    PP      DG + GFD D+   +   M +K  +   E+ G   AL   +ID
Sbjct: 26  LKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEMKVKCVWVEQEFDGLIPALKVRKID 85

Query: 97  C-LPSMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRE-LKDLNGKNIAVVTNTYTEDW 154
             L SM+I+ +RK+ +DF+  Y  T   + +   +   + L +L GKNI V   +  E +
Sbjct: 86  AILSSMSITEDRKKSVDFTNKYYNTPARLVMKAGTQVSDNLAELKGKNIGVQRGSIHERF 145

Query: 155 AKEYLGSLNANIKSYDSVEGLVSDVYSGNIDAVVTDQIQLDYYSKQNNFESRLIF----- 209
           A+E L  L A IK Y S   +  DV +G +D  V D   LD    + +      F     
Sbjct: 146 AREVLAPLGAEIKPYGSQNEIYLDVAAGRLDGTVADATLLDDGFLKTDAGKGFAFVGPAF 205

Query: 210 --EKMTIEYWAIAVKKDNHNLQNEINDVLFELDENKALYELKNKWY 253
             EK   +   IAV+K +  L+++IN  +  L EN    ++++K++
Sbjct: 206 TDEKYFGDGIGIAVRKGD-ALKDKINGAITALRENGKYKQIQDKYF 250