Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 257 a.a., amino acid-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 8/222 (3%)

Query: 36  GVLTVGITPEMPPQQYYE-DGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGE 94
           GVL +G      P  Y++  G L GFD+++ +E+A  +G+KPEF   ++ G    L    
Sbjct: 34  GVLKIGTEGTYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPEFLEGKWDGLIAGLDANR 93

Query: 95  IDC-LPSMTISPERKEDMDFSRAYIQTYVVVAV-FENSPYRELKDLNGKNIAVVTNTYTE 152
            D  +  + I+ ERK+  DFS  YI +  V+ V  ++   ++  DL GK  A    + T 
Sbjct: 94  YDAVINQVGITEERKKKYDFSEPYIASKAVLIVRGDDEEIKDFADLKGKKSA---QSLTS 150

Query: 153 DWAKEYLGSLNANIKSYDSVEGLVSDVYSGNIDAVVTDQIQ-LDYYSKQNNFESRLIFEK 211
           ++ K    S  A +   D  +  +  V +G  DA + D +  LD+  ++ +   ++  EK
Sbjct: 151 NFGKLAQAS-GAELVGTDGFDQSIQLVLTGRADATINDSLSFLDFKKQKPDANVKIAAEK 209

Query: 212 MTIEYWAIAVKKDNHNLQNEINDVLFELDENKALYELKNKWY 253
              +Y  I ++K    L   IN  L E+  +    ++  K++
Sbjct: 210 PDADYSGIIIRKGEPELLEAINKALAEIKADGTYEKISQKYF 251