Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 20/263 (7%)

Query: 1   VKIPTILVIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYYE-DGELKG 59
           ++I   L   +S  +    +G   + G++        + +G     PP    E DG L G
Sbjct: 1   MRISRRLAATASAAVFVLMAGVAMAEGEK--------VVIGTEGAYPPFNNLESDGTLTG 52

Query: 60  FDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEIDCL-PSMTISPERKEDMDFSRAYI 118
           FDID+ K +   M  +  F   ++ G   AL+  + D +  SM+I+ ERK+ +DF+  Y 
Sbjct: 53  FDIDIAKALCEEMKAECTFVTQDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYY 112

Query: 119 QTYVVVAVFENSPYRE--LKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLV 176
            T   + V ++SP  E     L+GK +    +T   ++A+ ++    + +K Y + +   
Sbjct: 113 NTPPAIVVPKDSPITEATAAALSGKALGAQGSTTHSNYAEAHM--KESEVKLYPTADEYK 170

Query: 177 SDVYSGNIDAVVTDQIQLDYYSKQNNFESRLIFEKMTI------EYWAIAVKKDNHNLQN 230
            D+ +G IDA + D + L  + K  +     +   + I      E   IA++K +  L+ 
Sbjct: 171 LDLANGRIDAAIDDVVVLSEWLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALRE 230

Query: 231 EINDVLFELDENKALYELKNKWY 253
           ++N  +  +  N    ++  K++
Sbjct: 231 KLNKAIEAIRANGKYKQINEKYF 253