Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 258 a.a., putative amino-acid ABC transporter, periplasmic solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 7/221 (3%)

Query: 38  LTVGITPEMPPQQYYEDGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEIDC 97
           L VG++    P  +     L+GF++D+M  +A   GL+ EF    + G   AL +  ID 
Sbjct: 27  LRVGMSGGYFPFTFVRQDVLQGFEVDVMNAVAEETGLEVEFVTMSFSGLIGALESDRIDT 86

Query: 98  LPS-MTISPERKEDMDFSRAYI--QTYVVVAVFENSPYRELKDLNGKNIAVVTNTYTEDW 154
           + + +TI+PER     F++AY+     VVV            DL GK +AV   +  E  
Sbjct: 87  IANQITITPERSAKFAFTQAYVIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGSNFEQL 146

Query: 155 AKEYLGSLNANIKSYDSVEGLVSDVYSGNIDAVVTDQIQLDYYSKQNNFESRLIFEKMTI 214
            +E   +    IK+Y++   +  D   G +DA V D++      +++     L     + 
Sbjct: 147 LRELPQADKIEIKTYEA--NIAQDTALGRVDAFVMDRVSSAQLIQESPLPLALAGAPFSE 204

Query: 215 EYWAIAVKK--DNHNLQNEINDVLFELDENKALYELKNKWY 253
              A+  ++  D+  L++ ++  L  L E   L E+  KW+
Sbjct: 205 IRNALPFRQGADSLALRDRVDTALTTLREGGKLAEISQKWF 245