Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 246 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%)

Query: 47  PPQQYYE-DGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEIDCLPS-MTIS 104
           PP ++ + + ++ G  +D +  IA   G K   K   + G    L  G+ D + S +TI+
Sbjct: 34  PPMEFVDANKQIVGLAVDYVDAIAKEAGFKVVHKNVAWDGIFAGLAAGKYDAIASSVTIT 93

Query: 105 PERKEDMDFSRAYIQTYVVVAVFENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNA 164
            ERK+ MDF+  Y      + V + +  + L+D+ GK +    +T      K   G    
Sbjct: 94  EERKKAMDFTMPYFDVKQALVVPKTTEAKTLEDMKGKTLGAQISTTGHFAIKRTAG---V 150

Query: 165 NIKSYDSVEGLVSDVYSGNIDAVVTDQ-IQLDYYSKQNNFESRL----IFEKMTIEYWAI 219
             KSYD +   + D+++G ID VV D  +  +Y  +Q  +  +L    I +    EY+ I
Sbjct: 151 TAKSYDEIGLAMEDLFNGRIDGVVCDDPVAANYALQQEEYAKKLKIAFIVDTPESEYYGI 210

Query: 220 AVKKDNHNLQNEINDVLFELDENKALYELKNKW 252
           AVK+ N  L + IN  +  +       +L+ KW
Sbjct: 211 AVKQGNKELVDLINKGIEAVKAKGIDAQLRAKW 243