Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 356 a.a., recombinase A from Synechococcus elongatus PCC 7942

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 32/232 (13%)

Query: 74  RQSVWRLSTGSTELDTVLAGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADLE 133
           R  V  +STG+  LD  L GG+    + E  G   SGKT +                 L 
Sbjct: 40  RLRVETISTGALTLDLALGGGLPKGRIIEVYGPESSGKTTL----------------TLH 83

Query: 134 GVVEEELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFAE 193
            + E + +   A ++D E    P      A   G+D    +DN  +++    +M +   E
Sbjct: 84  AIAEVQKQGGIAAFVDAEHALDP----VYATSVGVD----IDNLLISQPDTGEMAL---E 132

Query: 194 KIEDLIKGGNNIKLVIIDSLTSTF-RNEFTGR---GKLAERQQKLGRHMATLNKLADLYN 249
            ++ L++    + +V+IDS+ +   R E  G     ++  + + + + M  +        
Sbjct: 133 IVDQLVRSA-AVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKSG 191

Query: 250 CIVLVTNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRKSKGDKRVAKLY 301
           C V+  NQ+  K    +G  E   GG  +   A+ R  +R+ +  K+  + Y
Sbjct: 192 CTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLKKGTEEY 243