Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 361 a.a., recombinase A from Sinorhizobium meliloti 1021

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 37/250 (14%)

Query: 50  AKMIMAARDLCDLGF-KSGVELLKQRQSVWRL---STGSTELDTVLA-GGIESQSVTEFA 104
           +K + AA    +  F K  +  L  + SV  +   STGS  LD  L  GG+    + E  
Sbjct: 17  SKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEIY 76

Query: 105 GMFGSGKTQIMHQTCVNLQIREKIFADLEGVVEEELEAPKAVYIDTEGTFRPERVVQMAE 164
           G   SGKT +  QT    Q +  I                  ++D E    P      A 
Sbjct: 77  GPESSGKTTLALQTIAEAQKKGGICG----------------FVDAEHALDPV----YAR 116

Query: 165 GAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIKGGNNIKLVIIDSLTSTF-RNEFTG 223
             G+D    L+N  +++    +  +    +I D +     I +++IDS+ +   R E  G
Sbjct: 117 KLGVD----LENLLISQPDTGEQAL----EITDTLVRSGAIDILVIDSVAALVPRAEIEG 168

Query: 224 R--GKLAERQQKL-GRHMATLNKLADLYNCIVLVTNQVAAKPDAYFGVAEQAIGGHVVGH 280
                L   Q +L  + +  L       NC+V+  NQ+  K    FG  E   GG+ +  
Sbjct: 169 EMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKF 228

Query: 281 AATFRFFLRK 290
            A+ R  +R+
Sbjct: 229 YASVRLDIRR 238