Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 366 a.a., RecA DNA recombination protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 36/234 (15%)

Query: 65  KSGVELLKQRQSVW---RLSTGSTELDTVLA-GGIESQSVTEFAGMFGSGKTQIMHQTCV 120
           K  +  L QR SV     +STGS  LD  L  GG+    + E  G   SGKT +      
Sbjct: 33  KGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLA----- 87

Query: 121 NLQIREKIFADLEGVVEEELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVA 180
                      L  V E + +  +  ++D E  F P      A   G+     LD+  V+
Sbjct: 88  -----------LHVVAEAQKKGGQCAFVDAEHAFDP----LYARKLGVS----LDDLLVS 128

Query: 181 RAYNSDMQMLFAEKIEDLIKGGNNIKLVIIDSLTSTFRNEFT----GRGKLAERQQKLGR 236
           +    +  +    +I D +     I +++IDS+ +           G   +  + + + +
Sbjct: 129 QPDTGEQAL----EIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQ 184

Query: 237 HMATLNKLADLYNCIVLVTNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRK 290
            +  L       N +++  NQ+  K    FG  E   GG+ +   A+ R  +R+
Sbjct: 185 ALRKLTGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR 238