Pairwise Alignments

Query, 520 a.a., alpha-glucan family phosphorylase from Methanococcus maripaludis S2

Subject, 855 a.a., carbohydrate phosphorylase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  218 bits (555), Expect = 7e-61
 Identities = 188/614 (30%), Positives = 286/614 (46%), Gaps = 112/614 (18%)

Query: 6   YFSMEFAIDQSLKTYAGGLGFLAGSHFRAAKRLNVPLVGVSMLWSYGYYDQVRDREGRMK 65
           YFS+E+ I   L  Y+GGLG LAG H ++A  LNVPL  + + +  GY+ Q    +G  +
Sbjct: 110 YFSLEYGISLCLPIYSGGLGILAGDHLKSASDLNVPLAAIGIAYQQGYFRQYMTPDGWQQ 169

Query: 66  VENIRKY--YDF--------LTDIDLKVPVVINGTNIWVKAYKLEENTFNTCPIYFLTTD 115
                +Y  YDF        LT       V ++  +  +KA ++        P+Y L T+
Sbjct: 170 ----ERYPNYDFEQMPMRPALTPDGQPAVVHLDIGDRPLKA-RIWRVDVGRVPLYLLDTN 224

Query: 116 IPENDHLSRTISYGLYDGNNLTHIAQEIVLGIGGYKVIRECE-NVKRYHINEAHSLPVAF 174
           I EN    R I+  LY GNN   + QE+++GIGG K ++    + K  H+NE HS   AF
Sbjct: 225 IAENPPDFRQITERLYGGNNEMRLWQEMLIGIGGIKALQVLGISPKVIHMNEGHS---AF 281

Query: 175 KMLEDYGTDYVKEH--------------LLFTTHTPIPAGNETQDINLL--------KSM 212
             LE     ++KEH               +FTTHTP+PAGN+    +L+          M
Sbjct: 282 AGLERVRL-FMKEHGLSFEAAVEVAAAGSIFTTHTPVPAGNDRFAPDLMARYFEPYASDM 340

Query: 213 GFFGSIDTKTAEKY---GGNPFNLTVAALRMCKRSNAVSELHRDTSEKMWAWVTNREPIM 269
           G    +      +       PF + V ALR+ + +N VS+LH   S  MW  V N+ P+ 
Sbjct: 341 GLAFKVFMALGREVPHDDSEPFCMPVLALRLSRFNNGVSKLHGRVSRNMWKRVWNQFPVE 400

Query: 270 NI-----TNA--------------QDKYY---WQD-----------RQIREAAGKKDIKM 296
           ++     TN                D+Y    W++             I +A   +  + 
Sbjct: 401 DVPIGALTNGVHAPTWVAPDIGLLYDRYLGSNWREDPDSSRAWSLVDTISDAELWRTHER 460

Query: 297 LRER-----KMELKKQLFEEVA-----DQTGSLFDPNILTVVWARRFADYKRPSFLLRDE 346
           LR R     +M L +QL  + A          + +P  LT+ +ARRFA YKR + LL++ 
Sbjct: 461 LRARLVDFARMRLHRQLAAQGARRQDIQMAEEVLNPEALTIGFARRFATYKRANLLLQER 520

Query: 347 KRFKNLLKT--GKIQVIWAGKPHPADSNAQITFNWIVS--KTRELK-NVSVLTGYELKLS 401
            R   L+ +    +Q I+AGK HP D   +     +++  ++RE + ++  L  Y+++++
Sbjct: 521 DRLIRLVTSTDRPVQFIFAGKAHPQDQEGKQLMKELIALCRSRECRMSMVFLEDYDMEVA 580

Query: 402 KLLKQGSDVWLNTPRRPNEASGTSGMTASMNASIHMSTMDGWHVEWAKAYPKDS---FTI 458
             L  G D+WLN PRRP EA GTSGM A +N  +  ST+DGW   W +AY  D+   + I
Sbjct: 581 SHLVSGCDIWLNNPRRPLEACGTSGMKAMLNGVMQFSTLDGW---WDEAYRPDNSLGWAI 637

Query: 459 GDGVNL-DEDY----EANEMYKHLEKTI--KIYDTDE------WWEKAINSVNHVVEYFD 505
           G G    D DY    E   +Y  LE  I    YD         W  +   ++  +   F+
Sbjct: 638 GKGEEYEDPDYQDFVEVQTLYNILENDIIPDFYDRGHGGIPRTWVRRMKAALRELAPAFN 697

Query: 506 AERMIMEYTKKFYS 519
           + RM+M+Y    Y+
Sbjct: 698 SHRMVMDYAGTAYA 711