Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 154/653 (23%), Positives = 262/653 (40%), Gaps = 118/653 (18%)

Query: 18  GMRPQQ-EVLMGK-IYECVTKKKNLVVEAPTGVGKTLSYLIPALYFAERGKRVMILTETI 75
           G +P+Q +V M K +   +  +  LVVEA TG GKT +YL+PAL     GK+V+I T + 
Sbjct: 18  GFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALL---SGKKVIISTGSK 74

Query: 76  DQQERIVE-DLNSLKHNL----KVSFMMGKGNFFCKAK----------GEKANTLYCQLN 120
           + QE++   DL  +   L    +V+ + G+ N+ C  +           E   TL  QL 
Sbjct: 75  NLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPESDPTLLTQLV 134

Query: 121 KGCIYRPNKKP--VCVCGTKKEKIEFDGNTTFYCPLCL---------CDYQKAKIESFDA 169
           K   +  + +   +  C    E        T     CL         C   KA+  + DA
Sbjct: 135 KVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVSKARRRAMDA 194

Query: 170 NIIVMNNSIYYYLKDEIDKKK-------QTDIVICDEAHKLEGSIRNAATIVINPKYALR 222
           +++V+N+ ++  L D   K+        + ++ I DEAH+L     + A+       + R
Sbjct: 195 DVVVVNHHLF--LADLAIKETGFGELIPEAEVFIFDEAHQLP----DIASQYFGQSVSSR 248

Query: 223 RLRFMAYHYSNSRLRVHMDRVTEEDDEIFWTIVEDYVVKNASGKDCKNSLVFDGFKITSF 282
           +++ +A         + +   TE  D      V D +V+ A   D +  L   G++    
Sbjct: 249 QVQDLAKD-------IELGYRTEAKDMRQLQKVSDKLVQAAM--DLRIVLGEPGYR---- 295

Query: 283 GLKEDVAILGTLLEGYNEIVKIK---EKIEDLSENEELDKKDLKFKIDNKALIPLELQFV 339
                          + E++K+     ++E L+E  +     LK  +    L+    +  
Sbjct: 296 -------------GNWREVLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDTAFERA 342

Query: 340 A-----DRRISDVPMVEFLENLGNLRNITGNFVVYKNNG---SILCEPVLVSTYLNRLYG 391
                  RR+ DV             ++TG    Y       S+   P+ V+        
Sbjct: 343 TLILGRIRRVCDV-------------SVTGYSYWYDTTPRHFSLHITPLSVADKFREQIA 389

Query: 392 --DASVVHCSATLG---DLKIHAIKTGMGRSETLLLDSPFSKDRRNIIALSDGEDMKFNS 446
             + + +  SATL    D      + G+  S    L SPF   ++ ++ +          
Sbjct: 390 LKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSLVSPFDYQQQAVLCVP-------RY 442

Query: 447 IDFQSNNKKRNKANENLFKMVNAAKGNTLILFKSFGDLKTAHEYFLDAGYRGNIYCYESG 506
           +   +++    K    L  ++   +G    L  S   ++   E F +   R  +     G
Sbjct: 443 LPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRE---RLTLPVLMQG 499

Query: 507 MDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLLKREQTL 566
              K  K L E  +    LL+ATG F EG+D+ GD L+CVIID LPF  P      +  L
Sbjct: 500 ETSKQ-KTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAP------DDPL 552

Query: 567 LEERLKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVVIQDKR 619
           L+ R++  +++      F          T+ Q +GRLIR + D G ++I D R
Sbjct: 553 LKARIEDCRLRGG--DPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNR 603