Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

 Score = 89.0 bits (219), Expect = 6e-22
 Identities = 153/659 (23%), Positives = 271/659 (41%), Gaps = 124/659 (18%)

Query: 15  PYHGMRPQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPALYFAERGKRVMILTET 74
           P +  R QQ  +  KI   +   + LV EA TG GKT +YL+PAL     G +V++ T T
Sbjct: 26  PGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYLVPALL---SGGKVIVSTGT 82

Query: 75  IDQQERIV-EDLNS----LKHNLKVSFMMGKGNFFCKAKGEKA----------NTLYCQL 119
              Q+++  +D+ +    LK  +KV+ + G+ N+ C    +++          +  Y Q 
Sbjct: 83  KTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSLLDGRFQNREDVAYIQK 142

Query: 120 NKGCIYRPNKKPVCVCGTKKEKIEFDGNTTFYCPL------CL---------CDYQKAKI 164
               I R  K+     G K E ++   N T +         CL         C   +A+ 
Sbjct: 143 ----IARFAKETRS--GDKAECLDVPENATAWIMATSTRENCLGQECPHHKECFVLQARK 196

Query: 165 ESFDANIIVMNNSIYY---YLKDE--IDKKKQTDIVICDEAHKLEGSIRNAATIVINPKY 219
           E+  A+++V+N+ +++    LKDE   +     + VI DEAH+L       A++     +
Sbjct: 197 EALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLP----ETASLFFGDSF 252

Query: 220 ALRRLRFMAYHYSNSRLRVHMD--------RVTEEDDEIFWTIVEDYVVKNASGKDCKNS 271
           +  ++  +A    +  L    D        R+ ++  +     V     + A G+   N+
Sbjct: 253 STSQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRLTVAVEPARYAWGQLEGNA 312

Query: 272 LVFDGFKITSFGLKEDVAILGTLLEGYNEIVKIKEKIEDL-SENEELDKKDLKFKIDNKA 330
              DG       L++++ +L  +LE   E     E +E+    N EL ++ ++++ +   
Sbjct: 313 QFLDGLA----NLEKELELLNAILENQAER---SEGLENCWRRNGELLQRLIQWRQEQPG 365

Query: 331 LIPLELQFVADRRISDVPMVEFLENLGNL--RNITGNFVVYKNNGSILCEPVLVSTYLNR 388
           ++     F    +++  P+     ++  L  + + G+   +    + L      S Y N 
Sbjct: 366 VVRWGEAFNHSLQLNATPL-----DVARLFRKQLDGHPRAWIFTSATLAVQADFSHYCNE 420

Query: 389 LYGDASVVHCSATLGDLKIHAIKTGMGRSETLLLDSPFSKDRRNII-ALSDGEDMKFNSI 447
           L                       G+  +E+   +SPF   ++ ++ A  D  D      
Sbjct: 421 L-----------------------GLWDAESARWESPFDYGQQAVLYAPRDIPDPNLPGF 457

Query: 448 DFQSNNKKRNKANENLFKMVNAAKGNTLILFKSFGDLKTAHEYFL----DAGYRGNIYCY 503
                        E  +  + A  G    L  S   ++  HE       D G    +   
Sbjct: 458 T--------EAVVEAAWPALKACGGGAFFLCTSLRAMRRTHELLAAKLEDEGLEMPLL-- 507

Query: 504 ESGMDGKAAK-KLKEDFQKYGG-LLLATGRFAEGVDIPGDALTCVIIDSLPF-PVPTPLL 560
              + G+ +K +L E F++ G  +L+ +  F EGVD+ G+AL+ V+ID LPF P   P+L
Sbjct: 508 ---LQGEGSKTELLERFRRLGNAVLVGSQSFWEGVDVRGEALSLVVIDKLPFAPPDDPVL 564

Query: 561 KREQTLLEERLKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVVIQDKR 619
           K     +E+  +         SAF+          V Q  GRLIR ETD GV++I D R
Sbjct: 565 KARVEQMEKEGR---------SAFMEYQLPRAVINVKQGAGRLIRDETDRGVLMICDPR 614