Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 633 a.a., ATP-dependent helicase, DinG family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 69.7 bits (169), Expect = 4e-16
 Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 26/247 (10%)

Query: 379 PVLVSTYLNRLY-GDASVVHCSATLG---DLKIHAIKTGMGRSETLLLDSPFSKDRRNII 434
           P+ ++    +L+  + S +  SATL     L   A + G+  ++  +LDSPF   R+ + 
Sbjct: 373 PINIARECQQLFVANTSWIFTSATLQVNRSLAHFAKELGISDAKAHILDSPFDYPRQALF 432

Query: 435 ALSDGEDMKFNSIDFQSNNKKRNKANENL-FKMVNAAKGNTLILFKSFGDLKTAHEYFLD 493
            +          +   +N ++  K   ++  K + AA+G T ILF S    K   +  L 
Sbjct: 433 CVP-------RQLGNVANQQQALKQLVDVCVKAIEAAQGRTFILFTSH---KMLEQTALA 482

Query: 494 AGYRGNIYCYESGMDGKAAKKLKEDFQKYGG-LLLATGRFAEGVDIPGDALTCVIIDSLP 552
              R        G  GK  + L   F++ G  +LL T  F EGVD+ G  L+CVIID LP
Sbjct: 483 LRTRTQYPLLVQGQAGK--QSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLP 540

Query: 553 FPVPTPLLKREQTLLEERLKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGV 612
           F  P   L         R ++  +       F   S       + Q +GRLIR E D GV
Sbjct: 541 FVSPDEPL--------YRARADNISRQGGDPFTQVSLPQAIIALKQGVGRLIRDEKDCGV 592

Query: 613 VVIQDKR 619
           +++ D R
Sbjct: 593 LILCDNR 599



 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 39/215 (18%)

Query: 22  QQEVLMGKIYE-CVTKKKNLVVEAPTGVGKTLSYLIPALYFAERGKRVMILTETIDQQER 80
           Q +V M +I    +  K N V+EA TGVGKT +YLIPA+     GK+V++ T + + QE+
Sbjct: 22  QSQVQMAQIISNAIASKGNAVIEAGTGVGKTFAYLIPAML---SGKQVIVSTGSKNLQEQ 78

Query: 81  I-VEDLNSLKHNL----KVSFMMGKGNFFCK----AKGEKANTLYCQLNK---------- 121
           + ++DL +L   L    K++ + G+ N+ C+     + ++A+ +  +L            
Sbjct: 79  LFLKDLPALTAMLGIAPKLALLKGRNNYLCQYRLDRQMQEASHIEARLLDDLLKINQWAG 138

Query: 122 --------GCIYRPNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQKAKIESFDANIIV 173
                   G        P        ++        FY     C  +KA+  + DA IIV
Sbjct: 139 MSKDGDIGGLTSVAENSPALPLVVSTKETCLGQRCEFY---DACFTRKARSRAMDAKIIV 195

Query: 174 MNNSIYY---YLKDE--IDKKKQTDIVICDEAHKL 203
           +N+ +++    LKD    +     D+VI DEAH L
Sbjct: 196 VNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLL 230