Pairwise Alignments

Query, 392 a.a., thiolase domain-containing protein from Methanococcus maripaludis S2

Subject, 387 a.a., 3-ketoacyl-CoA thiolase (RefSeq) from Shewanella loihica PV-4

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 93/390 (23%), Positives = 153/390 (39%), Gaps = 85/390 (21%)

Query: 1   MKDVAIIGYGQTKFGELWEESFRSLIVEAG----VKAISDAN--VDGDDIDAMYVGTMSG 54
           MK   I+   +T  G      FR++  E+     +KA+   N  +D + I+ +  G +  
Sbjct: 1   MKQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQ 60

Query: 55  GLFVGQEHSASLIADYAGLNPVP----CTRVEAACASGSLALRSACLSIASGAHDVVLVG 110
            L    E   ++  + A L  +P       V   C S   A+  A  +I +G  D  +VG
Sbjct: 61  TL----EQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVG 116

Query: 111 GVEKMTDV-----ADATSAIATASDQEWEAFVGATFPSLYAMMAKRYMHEYGLTIEQLSS 165
           GVE M  V      D    +AT +  +    +G T   L  M        +G+T +Q   
Sbjct: 117 GVEHMGHVPMNHGVDFHPGLAT-NVAKASGMMGLTAEMLGKM--------HGITRQQQDE 167

Query: 166 WSAIAHENA----VHNKYAQ----------------------FRSKVTIDQVMRASPVAD 199
           ++  +H+ A    V  ++A                        R + +++ +    PV D
Sbjct: 168 FAVRSHQRAHAATVEGRFANEIHAIEGHDANGALIKVMHDEVIRPETSLESLATLRPVFD 227

Query: 200 P----LTLLHCSPVSDGASALIICDAEKATEYAPKDEIIYIKASTQASDTIALHDRKDMT 255
           P    +T    S +SDGASA+++ + EKA         + I+A  ++          D  
Sbjct: 228 PANGTVTAGTSSALSDGASAMLVMEEEKAKALG-----LPIRARIRSMAVAGC----DAA 278

Query: 256 TLNAAKV-ASDKAYKIAGIDAKKVDVAEVHDCFAINGLVLTEDLGFCKKGDAGKVVESGK 314
            +    V A+ KA + AG+    +D+ E+++ FA   L   +DLG     D         
Sbjct: 279 IMGYGPVPATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDE-------- 330

Query: 315 TRIDDESFVTVNPSGGLKAAGHALGATGIR 344
                     VN +GG  A GH LG +G R
Sbjct: 331 ---------KVNLNGGAIALGHPLGCSGAR 351