Pairwise Alignments

Query, 392 a.a., thiolase domain-containing protein from Methanococcus maripaludis S2

Subject, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 83/345 (24%), Positives = 132/345 (38%), Gaps = 75/345 (21%)

Query: 36  DANVDGDDIDAMYVGTMSGGLFVGQEHSASLIADYAGLNPVPCTRVEAACASGSLALRSA 95
           D N   D I      T+  G  + +  +ASL+A            V   C S   A+  A
Sbjct: 46  DPNTIEDVIWGCVQQTLEQGFNIAR--NASLLAGIP--KTAGAVTVNRLCGSSMEAIHQA 101

Query: 96  CLSIASGAHDVVLVGGVEKMTDV-----ADATSAIATASDQEWEAFVGATFPSLYAMMAK 150
             +I +G  D  ++GGVE M  V      D    +A            A    +  + A+
Sbjct: 102 ARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANNV---------AKASGMMGLTAE 152

Query: 151 RYMHEYGLTIEQLSSWSAIAHENA----VHNKYAQ----------------------FRS 184
                +G+T EQ  +++  +H+ A    +  ++A+                       R 
Sbjct: 153 MLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRP 212

Query: 185 KVTIDQVMRASPVADPL----TLLHCSPVSDGASALIICDAEKATEYAPKDEIIYIKAST 240
           + T++ +    PV DP+    T    S +SDGASA++I +  KA         + I+A  
Sbjct: 213 ETTMESLAVLRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALG-----LPIRARI 267

Query: 241 QASDTIALHDRKDMTTLNAAKV-ASDKAYKIAGIDAKKVDVAEVHDCFAINGLVLTEDLG 299
           ++          D   +    V A+ KA   AGI    +DV E+++ FA   L   +DLG
Sbjct: 268 RSMAVAGC----DAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLG 323

Query: 300 FCKKGDAGKVVESGKTRIDDESFVTVNPSGGLKAAGHALGATGIR 344
                            + DE    +N +GG  A GH LG +G R
Sbjct: 324 LLD--------------VVDEK---INLNGGAIALGHPLGCSGAR 351