Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 492 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) from Pseudomonas fluorescens FW300-N2E2

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 13/349 (3%)

Query: 4   VGIVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRA 63
           +GI G+G+ +P+ R+  + +  A    A  +K G     +++   DED+ T+AV +AR A
Sbjct: 3   IGITGFGAYIPRLRLSRQAVVAANAWYAPELK-GKARGHRAMANWDEDSITMAVAAARDA 61

Query: 64  LSRAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQM 123
           L    +  + +  V + S + P+A +  + +VAEA  +     A+D+  +  A  AG   
Sbjct: 62  LGGQDLQGR-VREVILASCTLPFAERLNAAVVAEALNLGEYTGASDVTGSQCAALAGFSQ 120

Query: 124 CMGLVGSEMMEYAMAVGADTAQGAPGDALEYTAAAGGAAFIIGAKKEEFIAKFNGTYSYT 183
            +    S      +   AD  +     A E     G AA + G  +E+ IA+  G  + +
Sbjct: 121 ALASAASAPGT-VLLTAADNRRTRAASAQELDYGDGAAALLFG--REQVIAEVLGQAASS 177

Query: 184 TDTPDFWR---REHEHYPKHGGRFTGEPAYFKHVLNGAKGMMEKMGTTSKDYDYCVFHQP 240
            D  D +R   RE +++ +   R+  +    + +    K  +   G  ++   + +F   
Sbjct: 178 VDFIDHFRLTGREIDYFGEE--RWVRDEGVSRCMPQVIKRALSDSGVGAEAVAHFIFPTS 235

Query: 241 NGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDHAKADDRIFVVSYGS 300
             K     A+  G   E    GL    +GNT  G   L L+N+L+ A+    I +  +GS
Sbjct: 236 LAKMDAQLAQACGIPAEAVVDGLAAE-VGNTGVGHGLLLLANVLESAEPGQVIVLAQFGS 294

Query: 301 GAGSDAFDITVTDRISEVVDKEITTEKLLEQKKYVDYAVYLKYRGKIRM 349
           GA   A  + VT  I     +   +  L   ++ + Y  +L Y+G++++
Sbjct: 295 GA--RAVVLRVTAEIKHFTARRGVSGWLARGREELSYTRFLTYKGQLQL 341