Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 325 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) from Xanthomonas campestris pv. campestris strain 8004

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 66/315 (20%), Positives = 126/315 (40%), Gaps = 27/315 (8%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I G GS LP+  +  +D++       + I+    + E+ +   D+ T+ +A  ++ +A+ 
Sbjct: 9   IAGTGSYLPEKVLTNDDMSKIVDTSDEWIRSRTGIRERHIVADDQTTSDLAYFASLKAME 68

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AG+   +I  + VG+ + P  + P++  + +A   +    A D+  AC      + +  
Sbjct: 69  AAGVTADEIDLIVVGTTT-PDLIFPSTACLLQARLGNVGCGAFDVNAACSGFVYALSVAD 127

Query: 126 GLVGSEMMEYAMAVGADTAQGAPGDALEYTAAAGGAAFIIGAKKEEFIAKFNGTYSYTTD 185
             V S   +  + VGA+T        +++T       F  GA      A  +     T  
Sbjct: 128 KFVRSGDAKTVLVVGAETLT----RIVDWTDRTTCVLFGDGAGAVVLKADEDTGILSTHL 183

Query: 186 TPDFWRREHEHYP----------KHGG---RFTGEPAYFKHVLNGAKGMMEKM----GTT 228
             D  ++E    P          K+GG      G    FK+ +     ++++     G  
Sbjct: 184 HADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDV-FKYAVKALDSVVDETLAANGLD 242

Query: 229 SKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDHAK 288
           + D D+ + HQ N +     AK+L    EQ    +     GNT S +V L L   +   +
Sbjct: 243 THDLDWLIPHQANLRIIEATAKRLDLPMEQVV--VTVDRHGNTSSASVLLALDEAVRSGR 300

Query: 289 AD--DRIFVVSYGSG 301
                 + + ++G G
Sbjct: 301 VQRGQLLLLEAFGGG 315