Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 323 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase 3 from Phaeobacter inhibens DSM 17395

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 23/313 (7%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           IVG G  LP+  ++  +         + I+    +  +      E T+ +A ++A+ AL+
Sbjct: 7   IVGTGHYLPERVVENAEFEATLDTTDEWIRSRSGIERRHFAAEGETTSMMATKAAQNALA 66

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AG+  +DI A+ V + +        + +V    G++  F A D++  C      +    
Sbjct: 67  DAGMTAEDIDAIVVATSTADLTFPSAATMVQAQLGMTRGF-AFDVQAVCAGFVYALSNAN 125

Query: 126 GLVGSEMMEYAMAVGADTAQGAPGDALEYTAAA---GGAAFIIGAKKEEFIAKFNGTYSY 182
            LV S      + +GA+T           T      G  A ++ A+     +   G  + 
Sbjct: 126 ALVASGQASKVLVIGAETFSRIMDWTDRSTCVLFGDGAGALVLEAQDSAGTSDDRGILA- 184

Query: 183 TTDTPDFWRREHEHYPKHGGRFTGEPAY--------FKHVL----NGAKGMMEKMGTTSK 230
            TD     R +   Y   GG  T    +        F+H +    + A   +E+ G  + 
Sbjct: 185 -TDLNSDGRYKDLLY-VDGGVSTQNTGHLRMQGNQVFRHAVEKLASTAHTALERAGLGAS 242

Query: 231 DYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLS--NILDHAK 288
           D D+ V HQ N +     AKK+G   E  K  +     GNT + ++PL LS        K
Sbjct: 243 DVDWIVPHQANIRIIQGTAKKMGLPME--KVVVTVQDHGNTSAASIPLALSVGKARGQIK 300

Query: 289 ADDRIFVVSYGSG 301
             D +   + G G
Sbjct: 301 QGDLVVTEAIGGG 313