Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 340 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase (RefSeq) from Shewanella loihica PV-4

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 70/317 (22%), Positives = 116/317 (36%), Gaps = 21/317 (6%)

Query: 1   MKEVGIVGYGSDLPKYRIKAEDIAGAWGKDAQA-IKRGLVVNEKSVPGPDEDTATIAVQS 59
           + +V I G  S LP+   +  D + +  ++  A I     +  + V   D+   ++   +
Sbjct: 6   VNKVSITGIVSVLPEISCENIDESSSSAREEMARIVASTGIRARRVASADQTALSLGKVA 65

Query: 60  ARRALSRAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTA 119
               +      P++I  V   +++  Y +   +  +    G+S D  A D+   C     
Sbjct: 66  CESLIDAMDWKPEEISLVVFVTQTPDYPLPGNAVQLQHQLGLSKDTIAYDVNLGCSGFVY 125

Query: 120 GI-QMCMGLVGSEMMEYAMAVGADTAQGAPGDALEYTAAAGGAAFIIGAKKEEFIAKFNG 178
           G+ Q+   + G    +  + VG  T      D    ++  G A   I  +K   +     
Sbjct: 126 GLWQVAQLVAGLSKGKALLVVGDTTTHQYRQDNRAVSSLFGDAVSAIAIEK--CMESDEM 183

Query: 179 TYSYTTDTPDFWRREHEHYPKHGGRFTGE-PAYF-----------KHVLNGAKGMMEKMG 226
            +S  TD        +   PK G    GE P  F           + V +     +   G
Sbjct: 184 VFSLGTDGAG---APYLIQPKGGALCPGESPELFMDGMQVFVFTLREVPSSITACLAAKG 240

Query: 227 TTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDH 286
             + D DYCV HQ N         KLG T EQ    +    +GNT S ++PL L   L  
Sbjct: 241 WQNADVDYCVMHQANEMMLKRLGDKLGLTHEQLVISM--GEVGNTSSASIPLALGLSLSE 298

Query: 287 AKADDRIFVVSYGSGAG 303
                 + +V  G G G
Sbjct: 299 PLLKGSVNLVLSGFGVG 315