Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 319 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III from Dechlorosoma suillum PS

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 73/329 (22%), Positives = 124/329 (37%), Gaps = 55/329 (16%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQ----AIKRGLVVNEKSVPGPDEDTATIAVQSAR 61
           I G GS LP   +  +D+  A G D      A + G  +  + +  P + ++ +  ++AR
Sbjct: 5   ITGVGSYLPAQAVSNDDLV-ARGVDTSDEWIATRTG--IRNRHLAEPGQTSSDLGFEAAR 61

Query: 62  RALSRAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGI 121
           RAL  AG++  ++  + V + +  +    T+ ++    G +   T  D++  C      +
Sbjct: 62  RALEMAGVDAAELDLIIVATSTPDFIFPSTACLLQSKLG-NKGATCFDVQAVCAGFVYAL 120

Query: 122 QMCMGLVGSEMMEYAMAVGADT----------------AQGAPGDALEYTAAAGGAAFII 165
            +    V S   + A+ VGA+                   GA    LE + A G  A  +
Sbjct: 121 SIAEKFVRSGSHKKALVVGAEVFSRILDWNDRGTCVLFGDGAGAVVLEASDAPGILATAL 180

Query: 166 GAKKEEFIAKFNGTYSYTTDTPDFWRREHEHYPKHGGRFTGEP-------AYFKHVL--- 215
            A         +G++      P             GG   G+P       A FK  +   
Sbjct: 181 HA---------DGSHHGILSVPG---------NVAGGAVIGDPFLRMDGQAVFKFAVRVL 222

Query: 216 -NGAKGMMEKMGTTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSG 274
            + A       G  + D D+ V HQ N +   +  KKLG   +  K  +     GNT + 
Sbjct: 223 ADVAAETCAAAGVATSDVDWLVPHQANLRIIDSTGKKLGIPSD--KVVVTVDRHGNTSAA 280

Query: 275 AVPLGLSNILDHAKADDRIFVVSYGSGAG 303
           +VPL L   +   +      V+  G G G
Sbjct: 281 SVPLALDTAVRDGRIQRGQKVLLEGVGGG 309