Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 354 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 73/348 (20%), Positives = 142/348 (40%), Gaps = 51/348 (14%)

Query: 1   MKEVGIVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSA 60
           M+   I G+G  +P   +  +D+A       + IK    ++++ +     +T+ +A  +A
Sbjct: 1   MQYATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHIS--HVNTSELASVAA 58

Query: 61  RRALSRAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAG 120
           +RAL+ AGI   +I  + + S S P  + P      +A  +  +  A D+  AC     G
Sbjct: 59  KRALAAAGIEGSEIDMIILASAS-PDTLIPNIASTVQA-NIGANCAAFDINAACSGFLYG 116

Query: 121 IQMCMGLVGSEMMEYAMAVGADT----------------AQGAPGDALEYTAAAGGAAFI 164
           + +    + S   +  + VGA+                   GA    +E T   GG   +
Sbjct: 117 LGLASSQIKSGQCKKVLVVGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDIPGG---V 173

Query: 165 IGAK-------KEEFIAKFNGTYS-YTTDTPDFWRREHEHYPKHGGRFTGEPAYFKHVLN 216
           +G +       ++   A F      ++ D+ DF+ +           F G+   FK  +N
Sbjct: 174 LGYELNNDPDGRDILKAGFGTAMDRFSADSLDFYIQ-----------FDGQEI-FKRAIN 221

Query: 217 GAKGM----MEKMGTTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTY 272
           G   +    +EK G    + D  + HQ N +   T   ++   +E+    +     GNT 
Sbjct: 222 GMNKLSTQVLEKCGVDKDEVDLVIPHQANERIIDTLVSRMKIPKEKAFVNIAN--YGNTS 279

Query: 273 SGAVPLGLSNILDHA--KADDRIFVVSYGSGAGSDAFDITVTDRISEV 318
           +  +P+ + + L+    K +  I   ++G+G  S A  +   +R++ V
Sbjct: 280 AATIPIAICDALEKGLIKPNQTILSCAFGAGLTSAALLLQWGERVTPV 327