Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 394 a.a., elongation factor Tu from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (277), Expect = 4e-29
 Identities = 117/431 (27%), Positives = 189/431 (43%), Gaps = 84/431 (19%)

Query: 9   VNIGMVGHVDHGKTSLTRKLTGVWT-------------DTHSEELKRGISIRLGYADCEI 55
           VN+G +GHVDHGKT+LT  +  V               D   EE +RGI+I   + +   
Sbjct: 13  VNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEY-- 70

Query: 56  KKCETCDEPECYTVGKKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVI 115
                 D P                   R  + VD PGH   +  M++GA+ MDG ILV+
Sbjct: 71  ------DTPN------------------RHYAHVDCPGHADYVKNMITGAAQMDGGILVV 106

Query: 116 AASEECPQPQTKEHLMALDALGVEKIIIVQNKIDLVSEEAAVENYN-QIKEFTK--GTVA 172
           AA++  P PQT+EH++    +G+  II+  NK D+V +E  +E    +++E         
Sbjct: 107 AATDG-PMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPG 165

Query: 173 ENAPIIPVSAHHGANLDV--------LLKAIQDFIPTPERDETVSPKLYVARSFDVNKPG 224
           ++ P+I  SA    N +         L +A+  +IP PER   ++  + +   F +    
Sbjct: 166 DDLPVIQGSALGALNGEAQWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVFSIQG-- 223

Query: 225 SEIKDLKGGVIGGSIIQGALKVGDELEIKPGIKVTEGNKTHWVPIITKIISLGVGSKKLK 284
                 +G V+ G I +G LKVGDE+ I  GIK T       V +  K++  G   + + 
Sbjct: 224 ------RGTVVTGRIERGILKVGDEVAI-VGIKETVKTTCTGVEMFRKLLDEGRAGENV- 275

Query: 285 TAYPGGLIGVGTELDPNLTKSDALSGSLAGIPGTL-PETLEKMEIEPQLLERVVGSQDEL 343
                G +  GT+      + +   G +   PG++ P T  K E E  +L +  G +   
Sbjct: 276 -----GALLRGTK------REEVERGQVLAKPGSITPHT--KFESEVYVLSKDEGGRHTP 322

Query: 344 VIEPLKTNEVLMLNVGTST---TVGVTVSARPDRAEIKLKL--PVCADKGDRVAISRKIG 398
             +  +          T +     GV +    D  ++ + L  P+  D+G R AI R+ G
Sbjct: 323 FFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAMDEGLRFAI-REGG 381

Query: 399 SRWRLIGYGII 409
              R +G G++
Sbjct: 382 ---RTVGAGVV 389