Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 650 a.a., selenocysteine-specific translation elongation factor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  134 bits (338), Expect = 6e-36
 Identities = 105/320 (32%), Positives = 151/320 (47%), Gaps = 48/320 (15%)

Query: 9   VNIGMVGHVDHGKTSLTRKLTGVWTDTHSEELKRGISIRLGYADCEIKKCETCDEPECYT 68
           V +G  GH+DHGKTSL R LTG+  D   EE +RGI+I LG+A C++             
Sbjct: 3   VVMGTAGHIDHGKTSLVRALTGIDCDRLEEEKRRGITIELGFAFCDLP------------ 50

Query: 69  VGKKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVIAASEECPQPQTKE 128
                    G    + ++  VD PGHE  +  M++GAS +D  +LVIAA +E   PQT+E
Sbjct: 51  ---------GAGAGVGRLGIVDVPGHERFVKNMVAGASGIDFVMLVIAA-DEGVMPQTRE 100

Query: 129 HLMALDALGVEKIIIVQNKIDLVSEEAAVENYNQIKEFTKGTVAENAPIIPVSAHHGANL 188
           HL     LG+   ++   K+D+V  E        +  F  GT  E API PVS+  G  L
Sbjct: 101 HLEICSLLGIRHGLVALTKVDMVDPEWLELAQEDVAGFLAGTFLEGAPIFPVSSTTGQGL 160

Query: 189 DVLLKAIQDFIPTPERDETVSPKLYVARSFDVNKPGSEIKDLK--GGVIGGSIIQGALKV 246
           D    A+++ +   ER+  + P   V RS     P   +  +K  G V+ G+++ G++KV
Sbjct: 161 D----ALREHLAMLERE--LRP---VRRSDLFRLPVDRVFTMKGHGTVVTGTMVSGSVKV 211

Query: 247 GDELEIKPGIKVTEGNKTHWVPIITKIISLGVGSKKLKTAYPGGLIGVGTELDPNLTKSD 306
           GDE+ + PG               TK+ SL      +  A  G    V  +    L   D
Sbjct: 212 GDEVVLYPG------------GAQTKVRSLQSHGGPVDVAPAGRRTAVNVQ---GLDVED 256

Query: 307 ALSGSLAGIPGTLPETLEKM 326
              G +   PGTL  +L  M
Sbjct: 257 VQRGDVLAHPGTLFPSLRWM 276