Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 397 a.a., translation elongation factor Tu (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (278), Expect = 3e-29
 Identities = 86/296 (29%), Positives = 137/296 (46%), Gaps = 63/296 (21%)

Query: 9   VNIGMVGHVDHGKTSLTRKLTGVW-------------TDTHSEELKRGISIRLGYADCEI 55
           VNIG +GH+DHGKT+LT  +T                 D   EE +RGI+I   + + E 
Sbjct: 13  VNIGTIGHIDHGKTTLTAAITKTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYET 72

Query: 56  KKCETCDEPECYTVGKKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVI 115
                                       R  + VD PGH   +  M++GA+ MDGAI+V+
Sbjct: 73  --------------------------ATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVV 106

Query: 116 AASEECPQPQTKEHLMALDALGVEKIIIVQNKIDLVSEEAAVENYN-QIKEF--TKGTVA 172
           AA++  P PQT+EH++    +GV  I++  NK D+V +E  +E    +++E   + G   
Sbjct: 107 AATDG-PMPQTREHILLARQVGVPYIVVFLNKCDMVDDEELLELVELEVRELLTSYGFPG 165

Query: 173 ENAPIIPVSAHHGANLD-----------VLLKAIQDFIPTPERDETVSPKLYVARSFDVN 221
           ++ P++  SA      D            LL A   +IP P+RD      + +   F ++
Sbjct: 166 DDVPVVRGSALKALESDDPNSDACKPIRELLAACDSYIPEPQRDIDKPFLMPIEDVFSIS 225

Query: 222 KPGSEIKDLKGGVIGGSIIQGALKVGDELEIKPGIKVTEGNKTHWVPIITKIISLG 277
                    +G V+ G + +G +KVG+E+EI  GIK T  +    V +  K++  G
Sbjct: 226 G--------RGTVVTGRVERGVIKVGEEVEI-VGIKDTTKSTCTGVEMFRKLLDQG 272