Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 673 a.a., selenocysteine-specific translation elongation factor SelB (RefSeq) from Shewanella sp. ANA-3

 Score = 95.1 bits (235), Expect = 6e-24
 Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 38/240 (15%)

Query: 15  GHVDHGKTSLTRKLTGVWTDTHSEELKRGISIRLGYADCEIKKCETCDEPECYTVGKKCD 74
           GHVDHGK++L R LTG+ TD   EE +RG++I LGYA   ++                  
Sbjct: 7   GHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLRDGT--------------- 51

Query: 75  SCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVIAASEECPQPQTKEHLMALD 134
                     +++F+D PGHE  +  ML G S +  A+LV+A  +    PQT+EHL  L 
Sbjct: 52  ----------RLAFIDVPGHEKFINNMLVGVSHVRHALLVLACDDGV-MPQTREHLQILA 100

Query: 135 ALGVEKIIIVQNKIDLVSEEAAVENYNQIKEFTKGTVAENAPIIPVSAHHG--ANLDVLL 192
            L +  + +V  K DLV ++ A +   +          E + +  V A+    A +D L 
Sbjct: 101 LLPLNSLTLVLTKRDLVDDQTAAKLTLEGMALLAEYGIEASGVFEVCANDAGDAGVDTLK 160

Query: 193 KAIQDF--IPTPERDETVSPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDEL 250
           + I D   + + + ++  S ++ + R+F V   G         V+ G++I G++ +GD L
Sbjct: 161 QHILDIAELQSTQAEDASSFRMTLDRAFSVKGAGC--------VVTGTVISGSVCIGDSL 212