Pairwise Alignments

Query, 185 a.a., thermonuclease family protein from Methanococcus maripaludis S2

Subject, 256 a.a., nuclease (RefSeq) from Shewanella loihica PV-4

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 25/149 (16%)

Query: 41  TVTRVVDGDTVHVDSNGVDYNIRLLGVDTPETYQKNIVSEYYINYETPISDTKYLDYWGH 100
           T   V+DGDT+ ++       +RL+G+D+PE      +  +Y     P ++         
Sbjct: 33  TFASVIDGDTLMLEDGR---QLRLIGIDSPE------IDRHYPELSEPFANR-------- 75

Query: 101 LATNYTRD-TLENKSVYVVFDKKSDKQDKYGRYLAYIYL-KNENFNENLIEYGF--ARVY 156
            A N+     L  + + + FD+K  + D  G+ LAY Y  + E+  E ++  G+  ARVY
Sbjct: 76  -ARNFLASRLLPGQKLKLAFDRK--RLDPKGKTLAYAYTQEGEHLQEIMLSQGYAKARVY 132

Query: 157 TSDFELKNEFLETEKTAKSDRIGLWNYNN 185
            +D+      +  E+ A+ +R GLW++ +
Sbjct: 133 QNDY-FWQCLVNIERQARQERRGLWSHKS 160