Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 415 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Pseudomonas fluorescens FW300-N2E2

 Score =  276 bits (706), Expect = 9e-79
 Identities = 157/416 (37%), Positives = 251/416 (60%), Gaps = 16/416 (3%)

Query: 13  GGNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKA 72
           GG L  +G   S +A  +GTP YV S       +  + ++        G   ++ FA KA
Sbjct: 8   GGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADAL------VGMPHLVCFAVKA 61

Query: 73  NTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRA 132
           N+NL V  +L++LG G DIVS GEL     +   ++KIVF+G  K +E+++  +E  +  
Sbjct: 62  NSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHC 121

Query: 133 FNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIAL 192
           FN++S  EL  +   A E+G  A V+ RVNP+VDA THP ISTG+K+NKFG+ I    A 
Sbjct: 122 FNIESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIAD--AE 179

Query: 193 ETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGG 252
           +    A ++ N++++G+ CHIGSQLT + PF++   +++  V  L + GI +R ++LGGG
Sbjct: 180 DVYVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGG 239

Query: 253 LGIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVK 312
           +G+ Y ++ + P+  D  KAV +     +G+ +L  L+ EPGR +VA AGVLL  VE++K
Sbjct: 240 VGVRY-RDEEPPLVADYIKAVRE---RLDGR-DLA-LMFEPGRYIVANAGVLLTQVEYLK 293

Query: 313 ETPVAKWVMIDAGMNDMMRPAIYESYHEITPCTIR-AEKEVVSVAGGLCESSDVFGKDRE 371
            T    + ++DA MND++RPA+Y+++ ++T    R        + G +CE+ D   K RE
Sbjct: 294 HTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPRDTAARPYDIVGPICETGDFLAKGRE 353

Query: 372 ISKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADLIS 427
           ++ +E  D +A+   GAYG  M++NYN+RG+ A +L +  +   +R RET+A+L +
Sbjct: 354 LA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVAELFA 408